Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1033 ATGGCCTCATCTTTATCATCATCTTCTTCTTCTTCTTCTCTAAAGTTTACAGTGCGAAGGTCCCAACCCCAACTGGTGGCTCCTGCTATCCCCACTCCTCATGAACTCAAGCTACTTTCCGACATTGATGATCAAGAAGCCCTGCGTTTCCAAGTTCCAATGATACAAATTTATGGAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTGAAGTGATTCGGAAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCAGGTAGGCTTAGGGAGGGACCTCACCGCAAACTAATAGTGGATTGCACTGGAGAAGGAGTCATGTTCATCGAGGGTGATGCTGACGTCACACTGGCTGAGTTTGGTGATTCTCTCCAACCTCCATTTCCATGCTTTGATGAACTGCTGTACGATGTTCCTGGCTCACAACAAATTACCGACACTCCCCTTCTACTCGTACAGGTGACACGACTCAAGTGTGGTGGTTTCATCTTAGCTCTCCGCTTTAGCCACACCATGGTTGATGGTTTTGGTTACCAACAATTCATGAACGCTTGGGCCGAAATGGCTAGAGGAGCAACCAAACCTTCCATTGCACCAGTATGGCGTAGGGAGCTCCTAATGGCAAGAGATCCACCTCGCATTACATGCAACCATCGCGAATACGAGCAAATCCAAGATACCCTCCCTTCTTCCAACCACAACTTGATTCAACGATCATTCTTCTTTGGACGCCTCGATATAGCTGCACTTCGCAAATCCATTCCCCAACACCTTCAACATTGCTCTACATTTGATCTTATCACAGCATGTTTGTGGCGATGTCGCACTAAAGCAATGCAGATAGAGGCAAATGAGGATGTTCGCATGATGTGCATAGTTAACGCACGTGGTCGGTTCAATCCTTCACTACCAGTTGGTTACTACGGCAATGCTTTTGCATATCCGGCGGCAGTAACGAGTGCAGGGAAGCTTTGCCAAAACCCATTTGGGTATGCGGTGGAGTTAATAAATAAAGTGAAAGGTGAGATGAAAGAAGAGTACTTGCAATCTGTTGCCGACTTGATGGTGATGAAGGAACGAAGCTTATTATTCACAACTGTGAGGTCTTATATTGTATCATATTTGGCACGTACGAATTTTAGAGTAATCGATTTTGGTTGGGGTGAAGCTATCTATGGTGGAGTGGCCCATGCTGGGGCTGGGGGCTTTCCAGCGGTATCTTATTTCTGTTCTGCTAAGAATGGAAAAGGAGAAGAAGGAATGACATTTTCGATTTTCTTGCCTGCTGAAGCTATGGAAAGGTTTACCAAAGAGTTTAATGACATGCTTCGCAACCAAAACCAACCTCAAAGCACTTCTAATTTTATAAGGTCTACCTTGTAA 1389 0.4507 MASSLSSSSSSSSLKFTVRRSQPQLVAPAIPTPHELKLLSDIDDQEALRFQVPMIQIYGKQASMAEKDPVEVIRKALSQTLVFYYPFAGRLREGPHRKLIVDCTGEGVMFIEGDADVTLAEFGDSLQPPFPCFDELLYDVPGSQQITDTPLLLVQVTRLKCGGFILALRFSHTMVDGFGYQQFMNAWAEMARGATKPSIAPVWRRELLMARDPPRITCNHREYEQIQDTLPSSNHNLIQRSFFFGRLDIAALRKSIPQHLQHCSTFDLITACLWRCRTKAMQIEANEDVRMMCIVNARGRFNPSLPVGYYGNAFAYPAAVTSAGKLCQNPFGYAVELINKVKGEMKEEYLQSVADLMVMKERSLLFTTVRSYIVSYLARTNFRVIDFGWGEAIYGGVAHAGAGGFPAVSYFCSAKNGKGEEGMTFSIFLPAEAMERFTKEFNDMLRNQNQPQSTSNFIRSTL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1033 462 PANTHER ALCOHOL ACYLTRANSFERASE 16 447 - -
Pvu6g1033 462 Pfam Transferase family 21 444 - -
Pvu6g1033 462 Gene3D - 234 447 IPR023213 -
Pvu6g1033 462 Gene3D - 17 225 IPR023213 -
Pvu6g1033 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1033 Pvu-Chr6 21626597 21629417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1033 14 439 Monolignol Biosynthesis Gene Families AT5G48930 30.543 8.58e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1033 K19861 - gmx:100792864 676.781