Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1030 ATGACTGAGAAAGACCCAGTTGAAGTGATTCGGCAAGCACTGTCGCAAACACTTGTCTTCTATTACCCATTTGCAGGTAGGCTTAGGGAGGGACCTCAACGCAAATTAATGGTGGATTGCACTGGAGAAGGAGCCATGTTCATGGAGGGTGATGCTGACGTCACACTGGCTGAGTTTGGTGATTCTCTCCAACCTCCATTTCCATGCTTTGATGAACTGCTGTACGATGTTCCTGGCTCACAACAAATTACCGACACTCCCCTTCTACTCGTAACACGACTTAAGTGTGGTGGTTTCATCTTAGTCGTTCGCTTCAACCACACTATGTTTGATGGTTTTGGTTACCAACAATTCATTAACGCTTGGGCCGAAATAGCTAGAGGAGTAACCAAACCTTCCATTGCACCAGTATGGGCAATGCAAATAGAGGCAGATGAGGATGTTCGCATGATGTGCATAGTCAATGCACGTGGTCGGTTCAATCCTCCACTACCGGATGGTTACTACGGCAATGCCTTTGCATATTTGGCGGCAGTAACGAGTGCAGGAAAGCTTTGCAGAAACCCATTTGGGTATGCGGTGGAGTTAATAAATAAAGTGAAAGGTGAGATGAAAGAAGAGTACTTGCAGTCTGTTGCAGACCTGATGGTGATGAAGGGACGAAGTTTATTATTCACAACTGTGAGGTCTTGTATTGTGTCATATTTGGCACGTGTGAATCTTAGAGCAGTGGATTTTGGTTGGGGTAAGGCTGTGTATGGTGGAGTGGCCCAAGCTGGGGCTGGGAGCTTTCCAGGAATATCGTATTTCTGCTCGGCTAAGAATGGAAAGGGAGAAGAAGGTATAATATTTTCGATTTTCTTGCCTGCGGAAGCTATGGAAAGGTTTGCCAAAGAGTTTAATCACATGCTTTGCAACCAAAATCAACCTCAAAGCACTTTATAA 945 0.4519 MTEKDPVEVIRQALSQTLVFYYPFAGRLREGPQRKLMVDCTGEGAMFMEGDADVTLAEFGDSLQPPFPCFDELLYDVPGSQQITDTPLLLVTRLKCGGFILVVRFNHTMFDGFGYQQFINAWAEIARGVTKPSIAPVWAMQIEADEDVRMMCIVNARGRFNPPLPDGYYGNAFAYLAAVTSAGKLCRNPFGYAVELINKVKGEMKEEYLQSVADLMVMKGRSLLFTTVRSCIVSYLARVNLRAVDFGWGKAVYGGVAQAGAGSFPGISYFCSAKNGKGEEGIIFSIFLPAEAMERFAKEFNHMLCNQNQPQSTL* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1030 314 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 139 304 - -
Pvu6g1030 314 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 140 - -
Pvu6g1030 314 Pfam Transferase family 143 303 - -
Pvu6g1030 314 Pfam Transferase family 3 139 - -
Pvu6g1030 314 Gene3D - 1 152 IPR023213 -
Pvu6g1030 314 PANTHER ALCOHOL ACYLTRANSFERASE 139 304 - -
Pvu6g1030 314 PANTHER ALCOHOL ACYLTRANSFERASE 4 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1030 Pvu-Chr6 21589972 21592274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1030 53 298 Monolignol Biosynthesis Gene Families AT5G48930 25.373 1.71e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1030 K19861 - pvu:PHAVU_006G098300g 633.254