Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1015 ATGGGTACTGAATTAAGCTACGCTCTTTCAAAACTGCATATGCTATCCACTTCAGATTATGCCTCCGTTGTGTCCATGAACATTTTTGTGGCTCTGCTTTGTGCTTGCATTGTCATTGGCCATCTTCTTGAGGAGAATCGGTGGGTGAATGAGTCCATCACTGCACTTTTGATAGGTATTTGCACTGGGGTAGTCATTTTGTTGCTAAGTCGCGGCAAAAGCTCGCATCTTCTAGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTGCCTCCGATCATATTTAATGCAGGGTTTCAAGTGAAAAAGAAACAGTTCTTTGTTAACTTCATGACCATCATGCTGTTTGGAGCTGTTGGTACATTAATAAATTGTAGCATTATAACTTTCGGTGTCATACAAATTTTTAAGAGAATGGGTGTTGGTAACTCACTGGAGATAGGAGATTATCTAGCAATTGGAGCCATATTTGCTGCAACAGATTCTGTGTGCACATTGCAGGTGCTAAACCAGGATGAGACACCTTTACTATACAGCCTTGTGTTTGGCGAGGGTGTTGTGAATGATGCAACATCTGTTGTGCTTTTCAATGCAATCAAAAGTTTTGATCTCAACATAATTGACCACAGAATTGGTTTGCATTTTTTCGGCAATTTCTTCTACCTGTTTATCGCAAGCACCTTGCTTGGGGTCTTGGCAGGTCTACTCAGCGCTTACATTATTAAAACGCTGTATATTGGCAGGCACTCTACAGATCGCGAGGTTGCTCTTATGATGTTAATGGCATATCTTTCCTACATTCTGGCTGAATTATGGTATCTGAGTGGCATTCTCACTGTATTCTTCTGTGGGATTGTTATGTCACATTATACTTGGCATAATGTGACTGAGAGCTCGAGAATCACTACCAAACACGCTTTTGCAACTCTCTCATTTGTTCTTGAAACCTTTATCTTCCTTTATGTTGGTATGGATGCGTTGGACATTGAAAAGTGGAGGTTTGTAAGCGATAGGCCGAAAACATCTGTTGCTGTTAGTTCAGTATTATTGGGCCTAGTACTTGCCGGAAGAGCAGCATTTGTTTTTCCCCTATCCTTCTTATCAAACCTCACTAAAAAGTCTGAAAGTGAAAAAATAAGTTTCAGTGAGCAGGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTATAATCAGTTCACCTTGTCCGGTCACACTGAACTGCGAACCAATGCCATCATGATCACCAGCACCATCACTGTTGTGCTTGTCAGCACAATGGTGTTTGGTTTGATGACGAAGCCACTCATAAGGTTTTTGCTGCCGGTTAGTCCACCTCCGAAACGCAAAAACAGCTTGGCAAATATGGAATCATCCAATAATCCTCCGAAATCAATCACTGTGCCCTTTCTTGGAGGCTCTCATGATTCTGAAAACGAACTTGATAGCAATGAAGATCATCGTCCAAGAACTATTCGTGCCTTACTAAGCACTTCAACACATAACGTTCATCGCTTATGGCGTACGTTTGATAATTCAATCATGCGTCCAGTCTTTGGTGGTAGGGGATTTGTTCCTGTGGCTCCTACCTCGCCAACTGAAGGCAGCGGTAACATTCAACAGTGGCATTAA 1650 0.4188 MGTELSYALSKLHMLSTSDYASVVSMNIFVALLCACIVIGHLLEENRWVNESITALLIGICTGVVILLLSRGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAVGTLINCSIITFGVIQIFKRMGVGNSLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNIIDHRIGLHFFGNFFYLFIASTLLGVLAGLLSAYIIKTLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVLETFIFLYVGMDALDIEKWRFVSDRPKTSVAVSSVLLGLVLAGRAAFVFPLSFLSNLTKKSESEKISFSEQVIIWWAGLMRGAVSMALAYNQFTLSGHTELRTNAIMITSTITVVLVSTMVFGLMTKPLIRFLLPVSPPPKRKNSLANMESSNNPPKSITVPFLGGSHDSENELDSNEDHRPRTIRALLSTSTHNVHRLWRTFDNSIMRPVFGGRGFVPVAPTSPTEGSGNIQQWH* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1015 549 MobiDBLite consensus disorder prediction 456 494 - -
Pvu6g1015 549 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 547 - -
Pvu6g1015 549 Pfam Sodium/hydrogen exchanger family 28 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu6g1015 549 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu6g1015 549 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu6g1015 549 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu6g1015 549 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu6g1015 549 Gene3D - 146 198 - -
Pvu6g1015 549 PANTHER SODIUM/HYDROGEN EXCHANGER 7 547 IPR018422 GO:0006812|GO:0015299|GO:0016021
Pvu6g1015 549 MobiDBLite consensus disorder prediction 457 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1015 Pvu-Chr6 21461171 21465563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1015 10 544 Antiporters AT3G05030 74.860 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1015 - - gmx:100789667 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1015 6 21461171 21465563 Pvu6g1015 6 21461171 21465563 ECH
Pvu6g1015 6 21461171 21465563 Pvu7g1893 7 42009224 42014784 PCT