Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1007 ATGGAGTGCAACAAGGATGAAGCTGTGAGGGCTAAGCAGATTGCTGAAAATAAGATGCAAGCTGGTGACTATGAAGGGGGGCTGAAATTTGCTACAAAAGCCCAAAGGCTGTTTCCTGATATTCAGAACATTGTTCAGATCCTTGCAGTTTGTGATGTTCACTGTGCTGCTCGGAAGAAACTCTCCGAGTTTGACATGGACTGGTATGGAATTCTTCAGACTCAACAGTCTGCTGATGAAGCAACCATTAAGAAACAGTATAGAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAAATCCGCGGGTGCAGAGGCTGCTTTCAAGTTGATTGGTGAAGCTAACAGAATGTTAAGTGATCAATGCAAGCGGGCTCTGTATGACTCAAAGATTGGAATTTCAGTGGGAAATACAGCAGCTAAGGTCGCACCTAGTCACCCAAATGGAAATGCAGGGAATTATCAGAACATTTTTAATTCACAGCCCCATGCTTGGAATCCATATCATCAGTTTGAAAATCAGACATTCTGGACATGTTGCTCTCATTGTAATACTAGATATCAATACTACAAAACTATTTTAAATCAGACCTTACGCTGTCAACAATGTTCTAAATCCTTTACAGCTCATGATATGGGGAACCACAATGTGCCACCAACATATTGGTCACCTTTTAATAACCACAAAGAGTCTGCAAAACATGCATCATCTAAAGAAGCATCAAAAAGCAATGGTGGAAAGTCTCATGGTGTAGAAGAGGAGGGTGTGTCCATGTCAAAATGCACTGCTGGAGTTGGTGCCTATTCTAAAGTTGCAAATAGCAGAAATGGCCACGTGGCTGCAGGAGTGACAAAGGCTGGTGTTAAAGTGTTCAAAGCCAAGGAATCACAAGCCTCAACTAAGGTTGGTTGTAAAAGAGCAAGGCAGTCAGCATCAAATGATAATAACAAAGCTGGAAATGGTAAAGGCATGAAAGATACCAAGGATCAAGAAAATACGGTTGATCCTCATAGGAAAACTTCAAGAAAAAAACAGCATGTTCTGTACCCAGAAACCGATAAAGCTGGTGATTTTGGGAGTTCACCCAGAAGGCCACGACACCATGAATCATTTACCACCCCTAAAGTAGAGGAAAAAGAAGTGCCAGTAACTGGTGGGTTGTTCAGTAACCTTAATCCAGCCTATCGTGCTACAGGTGTGGGTGGTCAGAATGGGGAGACAATAAATAAAGCAAGTGAACCACATGAAGAAACAATTTTAAGGAATAAAGCCAAAGTTGAGCAGACAAATGTGCAAGGAAGGGAGGTATTAAACTCAGATCTGAATGATAGAAAGTCTAAAGCCAACTATTGTTCTCCATCGAAGTCAAATTTGCCTCCCAATGCAGAGATTTCCTGTCCTGATCCAGATTTCAGTGATTTTGAGAGAGATAAGGCAGAGGATTGTTTTGCTGTTAATCAATTATGGGCTATTTTTGATAATGATGATGGTATGCCAAGATTCTATGCTCTCGTGAAGAAAGTGTACTCCCCTTTCAGGTTGCGGATTACGTGGCTAGAAGCTGACTCAGATGGCCTAGGTGAGATTAGGTGGCATGAAGCAGGTTTGCCCATTGCTTGTGGTAAGTTCAGACTCGGTGATTCTCAGAGAACTTCAGATCGTTTTATGTTCTCTCATCAGATGCATTGCATAAAAGGAAGTGACACTAGTACATATCTGATATATCCAAAGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATCTTGGATGGAGTTCAAATCCAGAAAAACATTTGGAGTATCAATTTGAATATGTGGAAGTTCTATCAGATTTTGATGAAAATGTTGGCATTGAAGTTGCTTATCTTGGCAAACTGGAAGGGTTTGTTAGTCTCTTTCTGCACACTGTGTTGAATAGTATTAGCTTATTTTGTATTTCACCTCATGAAATGTACAGGTTCTCTCATCGGATTCCTTCATACAAGATGACAGGTGCTGAAAGGAAAGGTGTTCCAAGTGGATCTTTTGAACTTGATCCTGCTGGTCTGCCTACTTGTCTTTTTGAAGTCGGTGATACTGGTGTTGCGAAAATGGATGGAGTCAATTGTTCTCATCGGGAATACTCAAACTCAAAAGTTAAACAGGCAAAGTCTAGTGATAGTATTCACAAATCGAAGTTGCAAGAGAGTATTGACTCTGAAAGAGCAGCACAAATCCTCAGAAGGTCTCCAAGGTCGAGCCAAAAAAGTATGGTCAATGGCCAAGCAAGCACTAGACAATTCACGGTCAGAAAGGATGACATAAACATTGAGCACAGGGGCTACAGTCCACCAGAGGGAAACGCTGCTTCATCTCAGACTAATGCGAGGAAGGTCAAGACACCTCAGAAACAAGAGAAAAATAGTTATGATGGAGAGACATTGAAAACTCGAAAGTTGCCTAGAGATCTAAGCAAGAAAGATGCTCTAGGAGATGCATCTGAAAGGACAAGATGTAAGTTGACTGCTAATCAATCAAAAAACAGCAAAAATGTGAAGAGCACCAACATTCCTCAGTTGGTTGGAGAATCAGTTTCTGACTTTAAAAAGGATAAAACTGAAAAGATGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGATAGAGATCACATGCCCAATACTTACGCCCAAATTAAGAAGATTGAATTCACTCCTAGTTTTAGAGTGCAGGTTTCCATGCTTGAACCCTGCCCAGTACCAAGTGTTAAAAGAGCAATATCTTGTGGAACCTTCGAAGTTAAAAAATCCAAATTACAGATTCTCTCTCCCTCTGCATTTTCTCATCAGTTAAAAGTTGAACCCTTGGTAAATAATCGATATGAAATTTACCCTAGAAAAGGTGAGGTTTGGTTTCTGTACGAGGATCAGAACTATGAACTGACTTCTTCAAAGCACGGCAGAGGTAAATGTAATATAGTAGAAGTATTAGCAGATAGTGAGAAGAGTATACAGGTTGTTGTTCTGTCGCCACATAACAACTCTCAGACAATTTTCAAAGCTCCCAGAATTCAGAGATCTAAAACTGGTGTAATTGAAGTATTAAGAGAAGAGGTTGGCAGGTTTTCACATCAGATTCCTGCTTTTCAGCACAGGGACAATGTGCATCTCATGGGGTGTTGGGAGCTTGATCCTTCTTCAGTTCCTGGTTCTTTTGTACCAATAAACTGA 3213 0.4065 MECNKDEAVRAKQIAENKMQAGDYEGGLKFATKAQRLFPDIQNIVQILAVCDVHCAARKKLSEFDMDWYGILQTQQSADEATIKKQYRKLALLLHPDKNKSAGAEAAFKLIGEANRMLSDQCKRALYDSKIGISVGNTAAKVAPSHPNGNAGNYQNIFNSQPHAWNPYHQFENQTFWTCCSHCNTRYQYYKTILNQTLRCQQCSKSFTAHDMGNHNVPPTYWSPFNNHKESAKHASSKEASKSNGGKSHGVEEEGVSMSKCTAGVGAYSKVANSRNGHVAAGVTKAGVKVFKAKESQASTKVGCKRARQSASNDNNKAGNGKGMKDTKDQENTVDPHRKTSRKKQHVLYPETDKAGDFGSSPRRPRHHESFTTPKVEEKEVPVTGGLFSNLNPAYRATGVGGQNGETINKASEPHEETILRNKAKVEQTNVQGREVLNSDLNDRKSKANYCSPSKSNLPPNAEISCPDPDFSDFERDKAEDCFAVNQLWAIFDNDDGMPRFYALVKKVYSPFRLRITWLEADSDGLGEIRWHEAGLPIACGKFRLGDSQRTSDRFMFSHQMHCIKGSDTSTYLIYPKKGETWAIFRHWDLGWSSNPEKHLEYQFEYVEVLSDFDENVGIEVAYLGKLEGFVSLFLHTVLNSISLFCISPHEMYRFSHRIPSYKMTGAERKGVPSGSFELDPAGLPTCLFEVGDTGVAKMDGVNCSHREYSNSKVKQAKSSDSIHKSKLQESIDSERAAQILRRSPRSSQKSMVNGQASTRQFTVRKDDINIEHRGYSPPEGNAASSQTNARKVKTPQKQEKNSYDGETLKTRKLPRDLSKKDALGDASERTRCKLTANQSKNSKNVKSTNIPQLVGESVSDFKKDKTEKMFQCGQIWAIYGDRDHMPNTYAQIKKIEFTPSFRVQVSMLEPCPVPSVKRAISCGTFEVKKSKLQILSPSAFSHQLKVEPLVNNRYEIYPRKGEVWFLYEDQNYELTSSKHGRGKCNIVEVLADSEKSIQVVVLSPHNNSQTIFKAPRIQRSKTGVIEVLREEVGRFSHQIPAFQHRDNVHLMGCWELDPSSVPGSFVPIN* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1007 1070 MobiDBLite consensus disorder prediction 222 256 - -
Pvu6g1007 1070 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pvu6g1007 1070 SMART dnaj_3 66 123 IPR001623 -
Pvu6g1007 1070 Gene3D DnaJ domain 53 143 IPR036869 -
Pvu6g1007 1070 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pvu6g1007 1070 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pvu6g1007 1070 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pvu6g1007 1070 MobiDBLite consensus disorder prediction 296 372 - -
Pvu6g1007 1070 CDD DnaJ 67 120 IPR001623 -
Pvu6g1007 1070 MobiDBLite consensus disorder prediction 794 829 - -
Pvu6g1007 1070 MobiDBLite consensus disorder prediction 708 830 - -
Pvu6g1007 1070 MobiDBLite consensus disorder prediction 741 764 - -
Pvu6g1007 1070 MobiDBLite consensus disorder prediction 321 338 - -
Pvu6g1007 1070 MobiDBLite consensus disorder prediction 345 372 - -
Pvu6g1007 1070 MobiDBLite consensus disorder prediction 302 320 - -
Pvu6g1007 1070 PANTHER - 1 695 - -
Pvu6g1007 1070 PANTHER - 811 1065 - -
Pvu6g1007 1070 Pfam Domain of unknown function (DUF3444) 858 1045 IPR024593 -
Pvu6g1007 1070 Pfam Domain of unknown function (DUF3444) 462 668 IPR024593 -
Pvu6g1007 1070 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 811 1065 - -
Pvu6g1007 1070 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 695 - -
Pvu6g1007 1070 MobiDBLite consensus disorder prediction 711 740 - -
Pvu6g1007 1070 Pfam DnaJ domain 67 128 IPR001623 -
Pvu6g1007 1070 SUPERFAMILY Chaperone J-domain 62 130 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1007 Pvu-Chr6 21391700 21396527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1007 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.032 3.30e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1007 - - var:108342824 1796.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1007 6 21391700 21396527 Pvu6g1007 6 21391700 21396527 ECH
Pvu6g1007 6 21391700 21396527 Pvu7g1889 7 41978174 41979621 PCT