Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0999 ATGGTCCCAATTGGTCATGCTTCTGATGACAAGCAGAGAAATCAAGACTCAGGAGAAATCGTTTTGGAGAAAGACAAAAGTGTGGTAACTCTAAGAGAACTCTTTGAAGAATGCATTAGTGACACTGACAAATCTCCTCAACCACCTGAATTTGCAGACAGTAATCCAAGCTCAAGGACACGGTTTCACTGGAGGATGCTTTTAAAACCATGCAAAATGAAATCAATGGAGCACCTACCCTCTTTTCCTCCAAGTTGTTTGTCAAGCATAACAAAGCCTACAAGCAAAGATATTGGAAAAAACACTATTCAATGTAATCCACACAGTTCCAGAACTTTGGTGAATTTCAGGCTTTCTGACCTGAGAAATGCAACCAACAACTTTAGCAATGAGAATATAATTGGAAGAGGTGGCTATGCTTATGTTTACAAGGGTAGCCTACAAGATGGGCAATTAATAGCAGTTAAGCAACTGAGTAGAGGGACTCCAGAAGACAGAATATCAATTCTTCTATCTGAGCTAGGAATTCTTGCTCATGTTGACCACCCTAATGCTGCCATGCTTATTGGATTTGGAGTAGAAGGGGGAATGCACCTTGTGTTCCAATTATCTCCTCTGGGAAATTTAGGATCTCTTCTTCATGGTCCATATAAAAATATATTAGATTGGAGCAGAAGGTATAAAATAATTTTGGGGATAGCGGATGGCCTCCTCTATCTTCATGAGATTTGTCAAAGGCGAATCGTTCATAGAGATCTTAAATCAGATAATATTCTGCTGACAGAGAATTTTGAGCCACAGATTTGTGATTTTGGGCTCTCAAAATGGCTACCAGAACCCTGTACTCATCATATTGTTTCAAAATTTGAAGGCACAATGGGGTATTTTGCTCCGGAGTATTTGACACGTGGCATAGTAAACGAAAAAACTGATATTTATTCCTTTGGGGTCTTACTTTTGGAGATTATAACTGGGCGTCATGCTTTGGATCATTTGAAAGAAAGTATTGTGTCATGGGCAAAGCCTTTATTCCAAGCTAATAATATTAAGGACCTTGTTGATCCTTCTCTGGGTGATGATTATGTCTGGGAACAAATGGAACGTGTTGTTTTGACAGCATCTCTGTGTGTTGAGCAGTTTCCTATCTTACGCCCCAGAATGAGTCAGATTGCAATACTGCTAAGAGGTGATGACTATGTGATGGAACATACTGAGAGGAGTAACAAGATGTCGAAGAAAACAACTGAAGGAGCTATCTAA 1260 0.3952 MVPIGHASDDKQRNQDSGEIVLEKDKSVVTLRELFEECISDTDKSPQPPEFADSNPSSRTRFHWRMLLKPCKMKSMEHLPSFPPSCLSSITKPTSKDIGKNTIQCNPHSSRTLVNFRLSDLRNATNNFSNENIIGRGGYAYVYKGSLQDGQLIAVKQLSRGTPEDRISILLSELGILAHVDHPNAAMLIGFGVEGGMHLVFQLSPLGNLGSLLHGPYKNILDWSRRYKIILGIADGLLYLHEICQRRIVHRDLKSDNILLTENFEPQICDFGLSKWLPEPCTHHIVSKFEGTMGYFAPEYLTRGIVNEKTDIYSFGVLLLEIITGRHALDHLKESIVSWAKPLFQANNIKDLVDPSLGDDYVWEQMERVVLTASLCVEQFPILRPRMSQIAILLRGDDYVMEHTERSNKMSKKTTEGAI* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0999 419 MobiDBLite consensus disorder prediction 1 22 - -
Pvu6g0999 419 SMART serkin_6 128 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0999 419 SUPERFAMILY Protein kinase-like (PK-like) 106 393 IPR011009 -
Pvu6g0999 419 Pfam Protein kinase domain 129 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0999 419 PANTHER OS08G0249100 PROTEIN 36 410 - -
Pvu6g0999 419 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Pvu6g0999 419 Gene3D Transferase(Phosphotransferase) domain 1 205 416 - -
Pvu6g0999 419 Gene3D Phosphorylase Kinase; domain 1 89 202 - -
Pvu6g0999 419 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 36 410 - -
Pvu6g0999 419 ProSiteProfiles Protein kinase domain profile. 128 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0999 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0999 Pvu-Chr6 21347935 21352854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0999 116 390 Trihelix Transcription Factor Family AT1G68690 42.807 5.00e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu6g0999 Pkinase 3.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0999 - - gmx:113001177 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0999 6 21347935 21352854 Pvu7g1882 7 41919399 41922529 PCT