Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0975 ATGGCTCTGGCATGGTTGAAATTAATCCTGATCACCATTCTCCTTCTCCTGGTGTTGATCTTCTTCTCGTTAAACCCTCCTTCTCCCATCGCCACACAACGCAGGTCACTCCTCTCTCCCTCAGCCTGCTCCACCAAATCCAATGGACTCCTCAACTACCACTGCTTCTTCCCCCAACACACCGCTCTCTCTATCCCATCCCTCTCCCTATTCCTCCTCCTCCACTTCTACATCCTCATCACCACCGCCCAGCACCACTTCTCCCTCGTCACCACCAAACTCGCCTCCCACCTCGCCCTCTCCCCCAGCATGGCCGCCGTCACGCTTCTCTCCCTCGGCAACGGCGCCCCCGACGTCTTCTCCTCACTCGCCGCCCTCCGAGCCGGCCAGTACCGCACCGGCTTCGGCGCCATCCTCTCCGCCGGCACCTTCGTCTCCGCCCTCGTCGTCGGCTTCGTCGCCATCTACGCCGCGCCCTTCTCCGTCGATCCCGCGCCCTTCGTTAGGGATGTTCTCTTCTACCTCACCGCTGCAATGTTCCTCTTCTACGTCTACCTCAGCGCCGAGATTTTCCTTTGGCAGGCCGTCGGATTCGTTGCCTTCTACGTGTTCTTCGTAGGTTTTGTGTTCTACATGGATTTGGGGATGGCGGATCGCACACGAAAGAGTTCCGCAGATCTCGAGGGACAGCTGGAATCGGATTCCGACGCTGTAGTTTCGAGATCAGCCGAGGAGGAGAAACGCCTTTCTGGAGTGCGTGGAGCATTTCGATTGATTTCTAAAACATGGGAGCTTCCTGTCGAAACTCTCCTGAGATTGACAATCCCTCAACCAGCAACAGCACAATGGAGCAGATTTTATGCATCAGCAAATATTGCACTTTGTCCACTGGCCCTCTTGTATGCCTGCAATTCATTCATGCCATTTAATCATCCCATAGTTTTCCTCCTCCCGAACACTCACTTTCCCCTCTGGTCAATAGTGTTCATGACAAGCTTCTCTCTTGCGTTTCTTCATTTTATAATCGAAAAAGAACCCCCCAAAACAGAGCATCTGCCTGTGGTTGTCATGGCATTTGTGATGAGCGTGTTTTGGATATCTACTACAGCTGGAGAGCTGGTGAACTGCCTGGAAGCTATAGGCACTCTTCTCAAACTGCCACCAGCACTCCTGGGTCTCACTGTACTGGCATGGGGAAATTCAGTAGGTGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCAGCGATGGCAATGGCAGGATGTTTTGCCGGACCAATGTTCAACATGCTTGTTGGCCTTGGAAGTGCTCTAGTCATACAGACGGCCAATATATATCCTAGAGCTTATCAGCTCAATTTCCACGTTGGTATCGTAATGGCATTTGTATTCCTGCTTTTAAGCCTTATGGGGTCTCTCTTGGTGATCACTTGGTGCAGGTTCAGAGTGCCTAGGTTTTGGGGATTCTGTCTTGTAGGCGTCTATGTTGCTTTTATGGCAGCGAGTTTAGTAATATCCATGTTCTGA 1533 0.5192 MALAWLKLILITILLLLVLIFFSLNPPSPIATQRRSLLSPSACSTKSNGLLNYHCFFPQHTALSIPSLSLFLLLHFYILITTAQHHFSLVTTKLASHLALSPSMAAVTLLSLGNGAPDVFSSLAALRAGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYVFFVGFVFYMDLGMADRTRKSSADLEGQLESDSDAVVSRSAEEEKRLSGVRGAFRLISKTWELPVETLLRLTIPQPATAQWSRFYASANIALCPLALLYACNSFMPFNHPIVFLLPNTHFPLWSIVFMTSFSLAFLHFIIEKEPPKTEHLPVVVMAFVMSVFWISTTAGELVNCLEAIGTLLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTANIYPRAYQLNFHVGIVMAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGVYVAFMAASLVISMF* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0975 510 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 256 509 - -
Pvu6g0975 510 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 41 234 - -
Pvu6g0975 510 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 256 509 - -
Pvu6g0975 510 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 41 234 - -
Pvu6g0975 510 Pfam Sodium/calcium exchanger protein 69 210 IPR004837 GO:0016021|GO:0055085
Pvu6g0975 510 Pfam Sodium/calcium exchanger protein 356 505 IPR004837 GO:0016021|GO:0055085
Pvu6g0975 510 Gene3D - 288 505 IPR044880 -
Pvu6g0975 510 Gene3D - 100 238 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0975 Pvu-Chr6 21144112 21147174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0975 23 508 Antiporters AT1G08960 69.261 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0975 K13754 - gmx:100775437 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0975 6 21144112 21147174 Pvu6g0975 6 21144112 21147174 ECH