Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0945 ATGAGGTTCATCATTACCTTGTTGGTGTTCCTATCGTTACAAAGAGCCAACATTTTGACTGTGGATGCCGCGTGGAGTGCAGTAGGAAATGAAAATCAAATCAAGAAAAGCTTAGGGGTGGATGAGAACGAAAACAAGGAAACTCCTAGACTTGAAAACTTCAGAACTTTGCTTGGACTCAAGTCACTCAACAGGTTTCACACAAGAAGGTCATGCTGCGGCGTTTTTGACTCTGACTTTGTCTCCCTCTCAGCTTCTCTGCCATCCAAAACCGAAGCTGAAGCTCCGAATTCGGAGCTGCACGTGCACCTTGGTTCCTATCAGTCACATAGGAGCATGCCACTTCGCAAGATTCAACAACAAGATAGAGGTAGCTCAGATAGAACAACACTGGTGGCTCTTGTAGTATCTGGTGGAGTTGCTACCTTAATCTGTGCACTCGGGTGTGTCTGTGTTTGCAAGAGATTTAGGAATCAGAAACGGAAACCCAATAGGACAATGCCACTCTTTAGCAAAAACGGAAGAACAGGAGGTACGTACCATCATTCATCAAGCAATGTGAGTTTAAACTCTGACCCTGATTTGCTTTACCTGGAACAAACTTGTGAGACACAAAGTATCACTTCAAGCCATAGTTCCCTAAAACGTGCAATTTATGAGAAGAAAGCGTTGAGTCAAGAAGAACATGACAATGCCAGCACTGGCAGTTCTTCCACCAAGGAAACTCTCTCTGTTCACGAGGATTTGGTATATGATGGTGGCAAAGCTTCCTCTGGAGAAAAAACTGTCCCTGAAGAAAGTCATTCATCATCAGATTACGAAAGTTTTCATTCATGTGTTGAAACAGAACCACTGTTTCTCTGTCCTACAAATGTAATTTCCGCGACAGCTCAATTTCCTTGTTCTTCTCACAATTCAACTTCAAAGGTAGAATCTAACCAATCACCATCCATTCCAAAGCATGAAGAGCAAAAGAGGAGTGAAACTTCTCAACCTAGCATTCCTCCCCCACCAAGCCCACCTCCGTTTTTGAAAGAAAACATTAACAGTGTGATCAAAACCCCACCTTCTCAACAACTGCCAAAACTCAAACCACTTCATTGGGACAAAGTAAGAGCCACTCCAGATCGAACCATGGTGTGGGATACGCTACGAACAAACTCGTTTGAGTTGGATGAGGTAATGATCGAGTCACTCTTTGGCTACAATTTACAAAATTCAATAAAGAACAACGAAGCAAAGAGTAAAACCCCGTCTCCTAAAGAGCATGTACTTGAGCCAAAACGGTTGCAAAACATAGCAATACTCTCTAAGGCTCTAAATATCACAGCAGCAGAAGTATGCGAGGCCCTGATACTAGGGAAGGGTTTGTCTTTGCAACAACTGGAGGCACTGGTAAAAATGGTGCCAACGAAGGAAGAAGAGGATAAGCTCTTGAACTACAAGGGACGTGTCAATGAACTTGGGTTCGCTGAAAATTTTGTGAGAGTAATGCTTAGCATACCATTTGCCTTTAAACGAGTGGAAGCCATGCTTTACAGAGAAACTTTCGAAGATGAAGTGACTCACATCAGTAACTCTTTCACAATGCTAGAGGAAGCATGCAAGGAACTAAGGTCAAGCAAGTTCTTTTTGAAATTGCTCGAAGCAGTACTCAAAACAGGAAACCGCATGAACGTGGGGACAATCAGGGGAGGTGCTAGAGCCTTCAAACTTGATGCCCTTCTGAAGCTGGCTGATGTGAAAGGAACAGATGGTAAAACCACCTTGCTCCATTTCTTTGTTCAGGAGATAGTTCGCTCAGAAGGAACCAAAGCTTCAAAGAGCATCATGGGACAGAAGAGTGAAAACAGAACGGAGGAAGAGAAGGAAGAAGATTATAGAAGAATGGGACTAAACCTTGTCTCTGGTCTTAGTGCTGAGTTATGCAACGTTAAAAAGACTGCCACCATTGACTTAAACGTGCTTGCAAGTTCTGTGTCGAACCTATCAAATGGGTTGGCTAACATGCAGAACCTAGTTAAAGGGCTGTTGTATGAAGATGAAAAAAACAAGAGCTTTGTCATTTCTATGAAGTGGTTTCTTAATTATGCAGAAAGAAAGGTGCAAGAGTTGCATGGAGACGAAGATAGAGTGATGGGTGGTGTAAAAGAAGTAACCGAGTATTTTCATGGGGATGTGAATGACGAAGAGTCGAATCCACTTCAAATCTTTGTAATCGTGAGGGACTTTCTGGAGATGGTAAACAACGTGTGTAATGGGCTTAAAAGGTCTATGAAATCTCCTCGCACTCATTGCATTGAGTAG 2307 0.4278 MRFIITLLVFLSLQRANILTVDAAWSAVGNENQIKKSLGVDENENKETPRLENFRTLLGLKSLNRFHTRRSCCGVFDSDFVSLSASLPSKTEAEAPNSELHVHLGSYQSHRSMPLRKIQQQDRGSSDRTTLVALVVSGGVATLICALGCVCVCKRFRNQKRKPNRTMPLFSKNGRTGGTYHHSSSNVSLNSDPDLLYLEQTCETQSITSSHSSLKRAIYEKKALSQEEHDNASTGSSSTKETLSVHEDLVYDGGKASSGEKTVPEESHSSSDYESFHSCVETEPLFLCPTNVISATAQFPCSSHNSTSKVESNQSPSIPKHEEQKRSETSQPSIPPPPSPPPFLKENINSVIKTPPSQQLPKLKPLHWDKVRATPDRTMVWDTLRTNSFELDEVMIESLFGYNLQNSIKNNEAKSKTPSPKEHVLEPKRLQNIAILSKALNITAAEVCEALILGKGLSLQQLEALVKMVPTKEEEDKLLNYKGRVNELGFAENFVRVMLSIPFAFKRVEAMLYRETFEDEVTHISNSFTMLEEACKELRSSKFFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFFVQEIVRSEGTKASKSIMGQKSENRTEEEKEEDYRRMGLNLVSGLSAELCNVKKTATIDLNVLASSVSNLSNGLANMQNLVKGLLYEDEKNKSFVISMKWFLNYAERKVQELHGDEDRVMGGVKEVTEYFHGDVNDEESNPLQIFVIVRDFLEMVNNVCNGLKRSMKSPRTHCIE* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0945 768 Gene3D Formin, FH2 domain 372 764 IPR042201 -
Pvu6g0945 768 Pfam Formin Homology 2 Domain 357 748 IPR015425 -
Pvu6g0945 768 SUPERFAMILY Formin homology 2 domain (FH2 domain) 335 756 - -
Pvu6g0945 768 ProSiteProfiles Formin homology-2 (FH2) domain profile. 353 768 IPR015425 -
Pvu6g0945 768 PANTHER FORMIN-LIKE PROTEIN 32 756 - -
Pvu6g0945 768 MobiDBLite consensus disorder prediction 229 244 - -
Pvu6g0945 768 MobiDBLite consensus disorder prediction 301 348 - -
Pvu6g0945 768 PANTHER FORMIN-RELATED 32 756 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pvu6g0945 768 MobiDBLite consensus disorder prediction 606 625 - -
Pvu6g0945 768 MobiDBLite consensus disorder prediction 252 271 - -
Pvu6g0945 768 MobiDBLite consensus disorder prediction 301 315 - -
Pvu6g0945 768 SMART it6_source 352 763 IPR015425 -
Pvu6g0945 768 MobiDBLite consensus disorder prediction 225 244 - -
Pvu6g0945 768 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0945 Pvu-Chr6 20889121 20892187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0945 335 756 FH2 protein (formin) Gene Family AT3G05470 68.384 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0945 - - gmx:100805407 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0945 6 20889121 20892187 Pvu6g0945 6 20889121 20892187 ECH
Pvu6g0945 6 20889121 20892187 Pvu7g2025 7 43643686 43647453 PCT