Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0933 ATGAGTCGAGGAAGTGCAGCCGGAGCTAAGGGGAAGAAGAAGGGGGCGACATTCACCATTGACTGTGCGAAGCCAGTGGAAGACAAGATCATGGACATTGCCTCTCTCGAGAAGTTTCTTCAAGAGAGGATCAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGACTCCGTTACTGTTGCCCGCGAGAAGACCAAGATCATTGTCACCTCTGACAGTAACTTTTCCAAACGGTATCTGAAGTACTTGACTAAGAAGTACTTGAAGAAACACAATGTGCGTGACTGGCTCCGAGTGATTGCTTCAAACAAGGATAGAAATATTTATGAACTGAGGTACTTCAACATTGCTGAAAATGAGGGCGAGGAAGAAGATTAG 375 0.464 MSRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVAREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0933 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Pvu6g0933 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pvu6g0933 124 Gene3D - 5 124 IPR038526 -
Pvu6g0933 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0933 Pvu-Chr6 20779862 20781312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0933 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.097 1.05e-67 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0933 K02891 - gmx:100499952 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0933 6 20779862 20781312 Pvu7g2034 7 43735363 43736512 ECH
Pvu7g2034 7 43735363 43736512 Pvu6g0933 6 20779862 20781312 ECH
Pvu6g0933 6 20779862 20781312 Pvu6g0933 6 20779862 20781312 ECH
Pvu6g0933 6 20779862 20781312 Pvu7g2034 7 43735363 43736512 PCT