Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0931 ATGGCGTGTAGAGGGGATTACGGCGAAGTCCAAAGAGAAGGTTGGAACATGGGTGTTTGTGTTTGTGTGTTTCGGTTGGGCCATCTTGTCCATCTACCAAAAATTCCCATCCCACAGCTAAATTTTCTTTATTTATCTTCTTCCTCTCCCATCTTTGGCTCGACCATCCATCCAAAACAAACACACTTCTTGTCTTGTGTTGTGATAGGAAGAGGGAAGAGGGAAGAGGGAAGAAGGAAGATCATGATGACGGAGGGGATGATGGACAAGGCGGTGTTGGATGACGTCATTCGGAGGCTTCTCGAAGGGAAAGGAGGCAAACAGGTCCAGCTCTCTGAGTCGGAGATCCGTCAACTCTGCGTCAATGCCCGCCAAATCTTCCTCTCTCAGCCAATTCTTCTCGAGCTCCGTGCCCCCATGCGCGTCTGCGGTGATATACATGGTCAGTACCAGGACTTATTGAGGCTTTTTGAATATGGTGGCTACCCTCCTGCGGCAAACTATTTGTTTCTGGGGGATTATGTGGATAGAGGGAAGCAGAGTTTGGAGACTATTTGTTTGCTTTTAGCCTACAAAATAAGATATCCAGACAAAATATTTCTATTGAGGGGAAACCATGAAGAAGCAAAGATTAACCGTATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTAAGGCTATGGAAAATATTTACCGACTGCTTTAACTGTTTGCCGGTGGCTGCCCTCATTGATGACAAAATACTTTGTATGCATGGGGGACTCTCTCCAGAATTAGAAAGTTTAGATCAGATAAAAGAGATTCAAAGGCCTACTGAAATTCCAGATAGTGGTCTCCTATGTGATCTGCTTTGGTCTGATCCTGATTCTAGCATTGAGGGTTGGGCGGAGAGTGACCGAGGCGTTTCATGTACCTTTGGACCTGATGTAGTTGCGGAATTTTTGGATAAAAATGACCTTGATCTTGTTTGCAGAGGGCATCAGGTTGTGGAGGATGGATATGAGTTTTTTGCAAAAAGAAGATTAGTCACGATATTTTCTGCTCCGAATTATGGTGGAGAATTTGACAATGCTGGTGCATTGTTAAGTGTTGATGATTCTCTTGTATGTTCCTTTGAGATATTGAAACCCGCTGATAGAGCATCGGGTAGTTCTTCGAAAATGAATTTTAAGAAGCAGCCACCCAAAATGGGAAAGATCTAG 1209 0.4367 MACRGDYGEVQREGWNMGVCVCVFRLGHLVHLPKIPIPQLNFLYLSSSSPIFGSTIHPKQTHFLSCVVIGRGKREEGRRKIMMTEGMMDKAVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLELRAPMRVCGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIFLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPELESLDQIKEIQRPTEIPDSGLLCDLLWSDPDSSIEGWAESDRGVSCTFGPDVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADRASGSSSKMNFKKQPPKMGKI* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0931 402 ProSitePatterns Serine/threonine specific protein phosphatases signature. 202 207 IPR006186 GO:0016787
Pvu6g0931 402 Gene3D - 85 388 IPR029052 -
Pvu6g0931 402 SUPERFAMILY Metallo-dependent phosphatases 91 382 IPR029052 -
Pvu6g0931 402 CDD MPP_PP1_PPKL 92 379 - -
Pvu6g0931 402 Pfam Calcineurin-like phosphoesterase 142 331 IPR004843 GO:0016787
Pvu6g0931 402 SMART pp2a_7 111 381 IPR006186 GO:0016787
Pvu6g0931 402 Pfam Serine-threonine protein phosphatase N-terminal domain 93 137 IPR031675 -
Pvu6g0931 402 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 84 394 - -
Pvu6g0931 402 MobiDBLite consensus disorder prediction 382 402 - -
Pvu6g0931 402 PRINTS Serine/threonine phosphatase family signature 139 166 IPR006186 GO:0016787
Pvu6g0931 402 PRINTS Serine/threonine phosphatase family signature 168 195 IPR006186 GO:0016787
Pvu6g0931 402 PRINTS Serine/threonine phosphatase family signature 201 225 IPR006186 GO:0016787
Pvu6g0931 402 PRINTS Serine/threonine phosphatase family signature 235 261 IPR006186 GO:0016787
Pvu6g0931 402 PRINTS Serine/threonine phosphatase family signature 264 291 IPR006186 GO:0016787
Pvu6g0931 402 PRINTS Serine/threonine phosphatase family signature 321 341 IPR006186 GO:0016787
Pvu6g0931 402 PRINTS Serine/threonine phosphatase family signature 343 359 IPR006186 GO:0016787
Pvu6g0931 402 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 84 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0931 Pvu-Chr6 20755398 20758944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0931 142 327 Calmodulin-binding Proteins AT5G63870 33.484 1.71e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0931 K06269 - gmx:100813792 646.351