Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0930 ATGGGGATTGATCTTAAGGCTGGGGGTAAGAGCAAAAAGACCAAAAGAACAGCACCCAAGTCCAACGACATCTACCTCAAACTACTTGTCAAGCTTTATCGCTTCCTTGTTCGAAGGACTGGCAGCAATTTCAATGCTGTGATACTCAAGCGCTTGTTCATGAGCAAGGTGAACAAACCTCCACTTTCTTTGTCGAGGTTGATTAGGTATACAAAGGGGAAGGAAGATAAAATTGCTGTTGTAGTGGGGACTATAACTGATGATATCAGAGTATATGAAGTTCCGCAATTGAAGATTACAGCACTTAAGTTTACAGAGAGAGCACGTGCAAGAATAGAGAAGGCAGGCGGTGAATGCTTGACCTTTGATCAGCTTGCACTTAGGGCTCCTTTGGGTCAGAATACGGTCCTTCTTAGAGGCCCCAAGAATGCCCGGGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCATTCCAAACCCTATGTTCGATCCAAGGGAAGGAAGTTTGAGAAGGCTAGAGGAAGGAGAAACAGCAGAGGATTTAGAGTTTAA 564 0.4557 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGTITDDIRVYEVPQLKITALKFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRSKGRKFEKARGRRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0930 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Pvu6g0930 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Pvu6g0930 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Pvu6g0930 187 MobiDBLite consensus disorder prediction 152 187 - -
Pvu6g0930 187 Gene3D - 1 187 - -
Pvu6g0930 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Pvu6g0930 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0930 Pvu-Chr6 20752337 20754641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0930 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.419 8.24e-103 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0930 K02883 - gmx:100527681 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0930 6 20752337 20754641 Pvu7g2037 7 43761478 43763737 PCT