Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0924 ATGGGGGGTGATGCACAGAAGAAGAGAATCGTCATCATTGGCGTTTCTACCTTCTTGCTGGTGGCTATGGTGGTAGCCGTGACGGTTAGCGTAGGCCTCAACAACAAGGGAGCAAGCGAGGATGAAACGGAAGCAAGAAAATCACACGTAGCTTCCTCCATGAAAGCGGTGAAAACCCTTTGCGCACCCACGGATTACCAGAAAGAATGCGAGGACAGTCTCAATGAAAACGCCGGCAACATCACTGACCCCAGGGAACTCATAAAACTCGCCTTCAACATCACCATCACCAGAATCAGCGATGGGCTCGGGAAAACACAGCTCCTGCACGACGTCGAGAGCGACCCCAGAACCAAGGAGGCCCTCGACACGTGCAAGCAACTGATGCACCTCTCCATCGAGGAGTTCAATCGCTCCCTCCAGAGGTTCAACAAGTTCGAACTCAACAGCCTCGATCGCATCCTAACCAGTCTCAAGGTGTGGCTCAGCGGCGCCGTCACGTACCAGGAAACGTGCCTTGACGCATTCGACAACACCACCACCGACGCTGGCAAGAAGATGCAGGGGCACTTGCAAACCGCCATGCACATGACCAGCAACGGTCTCGCTATCATCAGCGAGCTATCGAAAACTCTCTCCGATATGCACGTCTCCAAGTCTGGGCGCCGCCTCCTAACCGCTGCTGACGATTTGCCCGTCCTTGGCCACGAGACCGACGACTTTGACCTTCCCGATTGGGTTGAGAGCCGCTTTGGGGTTCGCAGACTCCTGCATATGACTGGACGCAAACGCATGGCGCATGTCGTTGTTGCCAAGGATGGCAGTGGAAATTTCACCACCATCAATGACGCCTTGAAGCACGTGCCCATGAAAAACCTAAGGCCGTTTATTATCTACATCAAGGAGGGTGTTTACGATGAGTACGTCGAAGTTTCCAGAAACATGACCCATGTCGTCATGATTGGTGATGGTGGTAGGAAGTCGAGGATCACAGGCAGCAAAAACTTCATCGATGGGGTTGGAACCTACAAAACCGCCAGTGCCGCCATTATTGGAGATTTCTTCGTTGCCATAGGCATGGGATTTGAGAACACAGCCGGCGCTGAAAAGCATCAAGCAGTGGCATTGAGGGTTCAATCTGACAGGTCCATCTTCTACAAGTGCCGTATGGATGGGTATCAAGACACACTTTACGCCCACGCCATGCGTCAATTCTACCGCGACTGCATTATTTCAGGTACCATCGACTTTGTCTTCGGTGATGCAGTGGCTGTGCTCCAGAACTGCACATTCGAGGTCAGAAAACCGATGGCAAACCAGCAATGCATTGTGACCGCACAAGGTAGAAAGGAGAGGAACCAGCCATCGGGTATAATCATCCATGGAGGGTCCATTGTGTCAGACCCCAGCTATTACCCAGTTAGGTTCGACAACAAGGCCTACTTGGCTCGTCCATGGAAGAATTTCTCAAGGACCATCATCATGGATTCCTACATTGATGACTTGATCACACCCGATGGCTACATGCCATGGCAAACAGTGGAAGGTTTAAGCGGAATGGACACTTGTTTCTACTCTGAGATCAACAACCATGGCCCTGGTGCAGACAAGTCGAAGCGCGTGAAATGGGAAGGAATCAAGAGCCTCTCAAACGACATGGCAACAACATTCTTGCCATCCCCGTTCTTCCATGGAGATGACTGGATTAGGGTCACAAGGGTTCCATACGATTCTGGCTTACCCTCCCCCACTCATTGA 1758 0.5182 MGGDAQKKRIVIIGVSTFLLVAMVVAVTVSVGLNNKGASEDETEARKSHVASSMKAVKTLCAPTDYQKECEDSLNENAGNITDPRELIKLAFNITITRISDGLGKTQLLHDVESDPRTKEALDTCKQLMHLSIEEFNRSLQRFNKFELNSLDRILTSLKVWLSGAVTYQETCLDAFDNTTTDAGKKMQGHLQTAMHMTSNGLAIISELSKTLSDMHVSKSGRRLLTAADDLPVLGHETDDFDLPDWVESRFGVRRLLHMTGRKRMAHVVVAKDGSGNFTTINDALKHVPMKNLRPFIIYIKEGVYDEYVEVSRNMTHVVMIGDGGRKSRITGSKNFIDGVGTYKTASAAIIGDFFVAIGMGFENTAGAEKHQAVALRVQSDRSIFYKCRMDGYQDTLYAHAMRQFYRDCIISGTIDFVFGDAVAVLQNCTFEVRKPMANQQCIVTAQGRKERNQPSGIIIHGGSIVSDPSYYPVRFDNKAYLARPWKNFSRTIIMDSYIDDLITPDGYMPWQTVEGLSGMDTCFYSEINNHGPGADKSKRVKWEGIKSLSNDMATTFLPSPFFHGDDWIRVTRVPYDSGLPSPTH* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0924 585 PANTHER PECTINESTERASE 10 582 - -
Pvu6g0924 585 SMART PMEI_2 52 204 IPR006501 GO:0004857
Pvu6g0924 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 209 IPR035513 -
Pvu6g0924 585 TIGRFAM PME_inhib: pectinesterase inhibitor domain 50 208 IPR006501 GO:0004857
Pvu6g0924 585 Pfam Pectinesterase 267 566 IPR000070 GO:0030599|GO:0042545
Pvu6g0924 585 Gene3D - 262 580 IPR012334 -
Pvu6g0924 585 ProSitePatterns Pectinesterase signature 1. 292 311 IPR018040 -
Pvu6g0924 585 SUPERFAMILY Pectin lyase-like 267 578 IPR011050 -
Pvu6g0924 585 PANTHER PECTINESTERASE 10 582 - -
Pvu6g0924 585 CDD PMEI-like_3 59 210 - -
Pvu6g0924 585 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Pvu6g0924 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 210 IPR035513 -
Pvu6g0924 585 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0924 Pvu-Chr6 20680551 20682900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0924 6 580 Carbohydrate Esterase AT3G05610 48.443 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0924 K01051 - gmx:100801686 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0924 6 20680551 20682900 Pvu7g2039 7 43779010 43781510 PCT