Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0923 ATGGCTATTTCCAAGCTATTCTTGCGCTTATTCATGGTCTATTTTCTGTGCGTTTTCTTCATCTGTGCATTTTCTGCATCCTCCTCTTCCTCCTCGAATACCATATGCAACCTCACACCATATTCATCGTTTTGCGAATCCAACTTGCCTTCTTATCACGGCCATGGTGGTGACATACACGAATATACCCGCTTTTTCTTAGACAAATCCTTGTCATCCTCAAAGATCTTTCTCTCATTGCTCTCTGAATACCTTAAGTCTCCATCCTTGTTATCAAAGCCCACCATCCTTGCCCTTCAAGATTGCCACCTTCTGACTGACCTAAACAATGGTTTTTTGTCCAGGACCCTAAAAAGCATCAATTCCACTAATACCCTTGGTACCTCAGAAGCTGAAACATTGCACACTTTGCTTACTGCTACACTGACCAACCAAGACACGTGCTTAACCAGCCTCCAAGAAACCACGCGAAACCCCGAAAATGACCTACTGTCACATCTTTCCACCGGAACCAAGCTTTATAGCATATCTCTTGCGCTTTTCAAGAGAGGATGGAAAGCCAAGAAAAACACAGAGAGAAAATTTGAAAGAAATGATCACATTATGTGGGAACAGAAGGTGTACGAGATTATCAGAAAAAAAGGAAGGAAGTTGCTTCGGTCGGATGCAGACAACGTTGTAGTGAACGAGAGAGTGGTGGTGAACCCAGATGGGTCTGGAAACTACAGAACAATCAATGATGCAGTGACTGCGGCTCCAGATAACTTTAGGGTTATTAACGGTTTTTTCGTGATTCATGTGGTGGGTGGAGTGTATGAAGAGTATGTTTCTATTCCCACAGAGAAGCAGTACCTGATGATGATAGGAGATGGAATTAACCAGACCATAATCACCGGCAATCACAGCGTGGCTGATGGTTGGACTACTTTCAGTTCTGCTACATTCGCTGTGATTGGTCAAGGTTTTGTGGCAATCAACATAACATTTCGCAACACAGCTGGAGCAATGAAGCACCAAGCAGTGGCCCTCAGAAGCGGTGCAGACTTTTCTGCATTTTACAATTGTAGCTTTGAAGGGTACCAAGACACCTTATACGCTCATTCTCTTACGCAATTTTACAGAGACTGTGATATTTATGGTACGGTGGACTTCATATTTGGTAATGCAGGAGTTGTCTTGCAAAACTGTAACATCTATCCTAGACTCCCAATGGAACACCAATTCAATGTCATTACTGCACAGGGTAGGACTGACATGAACCAAAATAGTGGCATATCCGTACACATGTGTACCTTAACCGCTGCAAGCGACTTGGCTTCTAGTAATCGAACCATAAAAACATACCTGGGAAGACCCTGGAAACCATATTCACAAACAGTTTATATGCAATCTTTCATGAACAGTTTGATAGATCCATTGGGTTGGGTACCTTGGCTAGGGAAGTTTCAATTGGACACCCTTTATTATGCGGAATTTGATAATCGAGGACCTGGATCTGACACTAGTAATAGGGTTACTTGGCCTGGGTACCATGTCATCAATGCTACAGATGCAGTTGATTTTACAGTTGCTAGTTTTATACTAGGTTATCTTTGGCTGCCTGACACAGGAGTACCTTACTATCCTGATTTAGGAAAGTACACACAAATGTTGTAA 1656 0.4263 MAISKLFLRLFMVYFLCVFFICAFSASSSSSSNTICNLTPYSSFCESNLPSYHGHGGDIHEYTRFFLDKSLSSSKIFLSLLSEYLKSPSLLSKPTILALQDCHLLTDLNNGFLSRTLKSINSTNTLGTSEAETLHTLLTATLTNQDTCLTSLQETTRNPENDLLSHLSTGTKLYSISLALFKRGWKAKKNTERKFERNDHIMWEQKVYEIIRKKGRKLLRSDADNVVVNERVVVNPDGSGNYRTINDAVTAAPDNFRVINGFFVIHVVGGVYEEYVSIPTEKQYLMMIGDGINQTIITGNHSVADGWTTFSSATFAVIGQGFVAINITFRNTAGAMKHQAVALRSGADFSAFYNCSFEGYQDTLYAHSLTQFYRDCDIYGTVDFIFGNAGVVLQNCNIYPRLPMEHQFNVITAQGRTDMNQNSGISVHMCTLTAASDLASSNRTIKTYLGRPWKPYSQTVYMQSFMNSLIDPLGWVPWLGKFQLDTLYYAEFDNRGPGSDTSNRVTWPGYHVINATDAVDFTVASFILGYLWLPDTGVPYYPDLGKYTQML* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0923 551 CDD PMEI-like_3 34 186 - -
Pvu6g0923 551 Pfam Pectinesterase 232 529 IPR000070 GO:0030599|GO:0042545
Pvu6g0923 551 PANTHER PECTINESTERASE 11 541 - -
Pvu6g0923 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 183 IPR035513 -
Pvu6g0923 551 ProSitePatterns Pectinesterase signature 2. 378 387 IPR033131 -
Pvu6g0923 551 PANTHER PECTINESTERASE 11 541 - -
Pvu6g0923 551 SUPERFAMILY Pectin lyase-like 229 542 IPR011050 -
Pvu6g0923 551 Pfam Plant invertase/pectin methylesterase inhibitor 33 180 IPR006501 GO:0004857
Pvu6g0923 551 SMART PMEI_2 27 180 IPR006501 GO:0004857
Pvu6g0923 551 Gene3D - 225 544 IPR012334 -
Pvu6g0923 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 183 IPR035513 -
Pvu6g0923 551 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 182 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0923 Pvu-Chr6 20674550 20677332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0923 6 544 Carbohydrate Esterase AT4G02330 50.960 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0923 K01051 - gmx:100801141 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0923 6 20674550 20677332 Pvu7g2040 7 43782137 43784099 PCT