Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0922 ATGGCCATGCTTAGTTTCCTTTTCATTCTCATGCTTTTACCCTCCTTTCAGGCTCTCTCATATCAACCCATTCCCTCAGAAATCCAAACACAAGACATGCAAGCATTGATTGCACAAGCATGCATGGACATTGAAAACCAAAACTCCTGCCTCACAAACATCCACAACGAGCTCACCAAAATAGGCCCTCCAAGCCCCACTTCAGTGATGAGTGCAGCACTGAAGGCCACACTCAACGAAGCAGTAATGGCCATTGACAACATGACAAAGATCACCACCTTCTCCGTGAGCTACCGCGAGCAACAAGCCATAGAAGACTGCAAGGAGCTCGTGGATTTCTCGGTTTCTGAGCTGGCATGGTCGTTGGGGGAGATGAGGAGAATTCGGGCAGGAGATAGCAATGTGCAATACGAGGGCAACCTGGAAGCGTGGCTTAGTGCAGCACTGAGCAACCAAGACACATGCCTTGAAGGGTTTGAAGGCACAGACAGACGCCTCGAGAGTTACATCAGTGGAAGCTTGACACAAGTCACACAACTCATCAGCAATGTTTTGTCCTTGTACACTCAGTTGCATACCTTACCCTTTAAGCCTCCAAGAAACACCACTGCTGCTACTTCAACAACTCAATCTGATGGAACCTCAGAGTTTCCTCAATGGATGAGTGAGGATGATCAAGAGTTGCTCAGAGCCAAGCCACAGGGTGTGCGTGCGGACGCGGTTGTGGCTTTGGATGGTACTGGTCATTATCGCTCCATCGCCGAAGCTGTTAATGCAGCTCCGAGTCATAGTCCAAGGAGGTATGTTATTTACGTGAAAAAGGGACTTTACAAGGAGAATGTTGACATGAAGAAGAAGATGACCAACATCATGCTCGTAGGAGATGGTATTGGCCAAACCATTATCACTAGCAACCGGAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACGCTTGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGTCGTTCCGGAACACAGCAGGGCCAGTGAACCATCAAGCGGTGGCACTGCGTGTGGATTCAGACCAATCAGCCTTCTACAGGTGCAGCGTGGAAGGGCACCAAGACACCCTCTACGCCCACTCCCTGCGACAGTTCTACCGTGAGTGCGAAATCTATGGCACCATAGACTTCATTTTCGGCAATGGAGCTGCAGTGCTGCAAAACTGCAAAATATACACCAGGGTCCCACTTCCCTTGCAGAAGGTTACCATCACGGCCCAAGGCAGAAAAAGCCCACACCAGTCCACGGGCTTCACCATCCAGGACAGCTTTGTTCTCGCCACCCAGCCCACCTACTTGGGCCGGCCCTGGAAACAATACTCCCGGACAGTTTACATTAACACTTACATGAGTGGGCTTGTTCAGCCCCGAGGCTGGCTTGAGTGGTTCGGAAACTTTGCCCTGAACACTTTGTGGTACGGTGAGTACAGAAATTATGGGCCTGGTGCATCGATGGCGGGCCGGGTCAGATGGCCCGGTTATCATGTAATTAAAGATGCTTCCACCGCTAGTTTTTTCACTGTTCAGAGGTTCATTAATGGTGACACGTGGCTTCCACGGACAGGTGTCAAGTTCACAGCAGGTCTCACCAACTGA 1632 0.5025 MAMLSFLFILMLLPSFQALSYQPIPSEIQTQDMQALIAQACMDIENQNSCLTNIHNELTKIGPPSPTSVMSAALKATLNEAVMAIDNMTKITTFSVSYREQQAIEDCKELVDFSVSELAWSLGEMRRIRAGDSNVQYEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHTLPFKPPRNTTAATSTTQSDGTSEFPQWMSEDDQELLRAKPQGVRADAVVALDGTGHYRSIAEAVNAAPSHSPRRYVIYVKKGLYKENVDMKKKMTNIMLVGDGIGQTIITSNRNFMQGWTTFRTATLAVSGKGFIARDMSFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSFVLATQPTYLGRPWKQYSRTVYINTYMSGLVQPRGWLEWFGNFALNTLWYGEYRNYGPGASMAGRVRWPGYHVIKDASTASFFTVQRFINGDTWLPRTGVKFTAGLTN* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0922 543 CDD PMEI-like_3 49 193 - -
Pvu6g0922 543 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 6 541 - -
Pvu6g0922 543 ProSitePatterns Pectinesterase signature 2. 383 392 IPR033131 -
Pvu6g0922 543 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 192 IPR035513 -
Pvu6g0922 543 Pfam Pectinesterase 239 527 IPR000070 GO:0030599|GO:0042545
Pvu6g0922 543 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 192 IPR006501 GO:0004857
Pvu6g0922 543 PANTHER PECTINESTERASE 6 541 - -
Pvu6g0922 543 SMART PMEI_2 32 187 IPR006501 GO:0004857
Pvu6g0922 543 MobiDBLite consensus disorder prediction 198 218 - -
Pvu6g0922 543 Pfam Plant invertase/pectin methylesterase inhibitor 36 187 IPR006501 GO:0004857
Pvu6g0922 543 Gene3D - 234 541 IPR012334 -
Pvu6g0922 543 SUPERFAMILY Pectin lyase-like 236 540 IPR011050 -
Pvu6g0922 543 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0922 Pvu-Chr6 20666290 20668296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0922 1 543 Carbohydrate Esterase AT3G05620 62.883 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0922 K01051 - gmx:100810565 1000.35