Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0921 ATGTTGTCGGAATCTGTTCTCTGCCACTTGACTGAGGACCTTCTCATCCGGCTCCTGGAGAAGCTCGGCCCGGATCGGAAGCCGTGGAGGCTGGTGTGCAAAGATTTTCTCCGGGTCGAATCGGTGACCCGGAAGAGTATTCGGATCCTCCGCATCGAGTTCCTGCTTGGGCTGCTGGAGAAGTTCTGCAACATTGAGACGTTGGACCTGTCGCTGTGTCCGCGGATCGAGGATGGAATTGTGTCGGTTATGCTGAGTCAGGGATCGGCGAGTTGGACTCGGGGACTAAAGAGGCTCGTGCTGAGTCGCGCCACCGGGTTGGGCCACGCGGGTTTGGAGATCCTCATTCGGGCGTGTCCAATGTTGGAGGCTGTCGATGTGTCCCACTGTTGGGGCTATGGGGACAGAGAGGCCGCGGCGCTATCGTGCGCCGCGAGGTTGAGGGAACTCAGCATGGATAAGTGCTTGGGAGTTACTGATATTGGGTTGGCGAAGATTGCCGTCGGTTGTGAGAAATTGGAGAGGCTGAGTTTGAAGTGGTGCTTGGAGATTTCTGATATGGGAATTGATCTTCTGTGCAAGAAGTGCCTGGACTTGAAATTTCTGGATGTGTCCTATCTCAAGGTAACAGGCGAATCTTTGAGATCGATAGCTTCTCTGTCAAAGCTTGAGGTTTTCGTTATGGTGGGTTGCTCTTTAGTGGATGATGTCGGATTACGGTTTCTTGAAAAAGGATGTCCACTACTTAAGGCAATTGATGTATCGAGGTGTGATTGTGTTAGCTCATCCGGTTTAATATCTGTGATTAGCGGGCATGGAGATCTTGAGCAGTTGGATGCAGGATATTGCCTCTCTGAGCTTTCAGCACCTCTTGTTAAATGCTTGGAGAATCTAAAACAGCTGAGAATAATTAGAATTGATGGTGTTCGAGTTTCTGACTTCATCCTCCAGACAATAGGCACCAATTGCAAGTCTTTAGTGGAACTTGGTTTAAGCAAATGTGTTGGTGTGACCAACAAAGGAATTATACAGCTATTACCTGGCTGTGGCAATTTGAAGGTACTTGATTTGACTTGTTGTCGGTTCATCTCAGATGCTGCCATCTCTACTATAGGAGACTATTGTCCAGACCTTGTCTGTCTGAAGCTAGAATCTTGTGATATGGTGACTGAGAAGTGTCTTTATCAACTTGGATTAAATTGCTCGCTTCTTGAAGAGCTTGATCTTACTGATTGCTCTGGTGTTGATGACATAGCACTAAGATATCTATCAAGATGTTCAGAACTCGTAAGACTGAAGTTAGGATTATGCACCAACATATCAGACATAGGATTGGCACACATTGCTTGTAACTGCACAAACATGACTGAACTTGATCTCTATCGCTGTGTACGTATTGGAGATGATGGGCTGGCAGCGCTGACGAGTGGATGCAAGAGGCTGACAAAGCTCAACATGTCATATTGTAATAGAATTACTGACAGAGGGATGGAGTATATCAGCCATCTTGGTGAACTATCTGATCTGGAGTTGCGCGGGCTTTCAAATATCACAAGCATTGGAATAAGATCAGTTGCAATGAGTTGCCAGAGATTGGCAGATTTAGATTTGAAGCACTGTGAAAAAATTGATGATTCAGGTTTCTGGGCCCTTGCTTTTTATTCACAAAACCTGCGGCAGATAAATATGAGCTACTGTATTGTGTCAGATGTGGTGTTGTGCTTCCTTATGGGTAACCTGAAACGCCTCCAAGATTCCAAACTGGTGTGTCTTCCTAAAGTCACTGTAAAAGGATTGGAAGTTGCCCTTAGAGCTTGCTGTGGTCGGATTAAAAAGGTTAAACTACAGAGATCCCTCAGGTTCTTGCTTTCCTCAGAAATGCTGGAGACAATGCATGCAAGAGGGTGCAAGATCAGATGGGATTAA 1926 0.4626 MLSESVLCHLTEDLLIRLLEKLGPDRKPWRLVCKDFLRVESVTRKSIRILRIEFLLGLLEKFCNIETLDLSLCPRIEDGIVSVMLSQGSASWTRGLKRLVLSRATGLGHAGLEILIRACPMLEAVDVSHCWGYGDREAAALSCAARLRELSMDKCLGVTDIGLAKIAVGCEKLERLSLKWCLEISDMGIDLLCKKCLDLKFLDVSYLKVTGESLRSIASLSKLEVFVMVGCSLVDDVGLRFLEKGCPLLKAIDVSRCDCVSSSGLISVISGHGDLEQLDAGYCLSELSAPLVKCLENLKQLRIIRIDGVRVSDFILQTIGTNCKSLVELGLSKCVGVTNKGIIQLLPGCGNLKVLDLTCCRFISDAAISTIGDYCPDLVCLKLESCDMVTEKCLYQLGLNCSLLEELDLTDCSGVDDIALRYLSRCSELVRLKLGLCTNISDIGLAHIACNCTNMTELDLYRCVRIGDDGLAALTSGCKRLTKLNMSYCNRITDRGMEYISHLGELSDLELRGLSNITSIGIRSVAMSCQRLADLDLKHCEKIDDSGFWALAFYSQNLRQINMSYCIVSDVVLCFLMGNLKRLQDSKLVCLPKVTVKGLEVALRACCGRIKKVKLQRSLRFLLSSEMLETMHARGCKIRWD* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0921 641 SMART LRR_CC_2 196 220 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 93 118 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 323 348 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 375 400 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 170 195 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 144 169 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 478 503 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 529 554 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 504 528 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 246 271 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 452 477 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 62 86 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 349 374 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 427 451 IPR006553 -
Pvu6g0921 641 SMART LRR_CC_2 401 426 IPR006553 -
Pvu6g0921 641 Gene3D Ribonuclease Inhibitor 3 194 IPR032675 -
Pvu6g0921 641 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 10 598 - -
Pvu6g0921 641 SUPERFAMILY RNI-like 295 520 - -
Pvu6g0921 641 Pfam Leucine Rich repeat 528 547 IPR001611 GO:0005515
Pvu6g0921 641 Pfam Leucine Rich repeat 351 371 IPR001611 GO:0005515
Pvu6g0921 641 Pfam Leucine Rich repeat 478 501 IPR001611 GO:0005515
Pvu6g0921 641 Pfam Leucine Rich repeat 451 474 IPR001611 GO:0005515
Pvu6g0921 641 Gene3D Ribonuclease Inhibitor 217 399 IPR032675 -
Pvu6g0921 641 SUPERFAMILY L domain-like 29 391 - -
Pvu6g0921 641 Gene3D Ribonuclease Inhibitor 416 638 IPR032675 -
Pvu6g0921 641 PANTHER UNCHARACTERIZED 10 598 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0921 K10268 - gmx:100802904 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2431 8 54891063 54893413 Pvu6g0921 6 20659187 20664651 PCT