Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0919 ATGCCGCCACGTCCAACGCCCTTCTTCATCGTCTTTCTATGTTTTCTCAATGCCTGTTCTTCGGTCTTCGCCACCCAATTTGACTTTGGAACCTTGACCATGAGCACACTGAAGCTTCTCGGTGATGCCCATTTGAACAACAACACCATCAGCCTCACCGGAGATCCCGCCGTCCCAAACTCCGCTGCTGGCAGAGCGCTTTACTCCGCTCCCGTCAGATTCCGGCTACCGGGGTCCCCATCTCCGGCCAGCTTCGCCACCTTCTTCTCCTTCTCCGTCACCAACCTCAATCCCTCCTCTGTCGGCGGCGGCCTTGCCTTCGTCATCTCGCCGGACTCCACCGATGTCGGCGATTCCGGCGGCTTGCTCGGTCTGCAAAACCCCGCCGCCGCCACAGGCGATGGCGGCGGGTTCGTCGCTGTTGAATTCGACACCCTGATGGACGTGGAATTCAGCGACATTAATGGAAACCATGTGGGGTTGGACTTAAACAGCGTTGTTTCGGCTCAAGTTAGCGACTTGGGAAGCGTTGGAGTGGAACTCAAAAGCGGTGACTCGGTGAACGCGTGGATCGAGTACGATGGAAGCAGCAAAGGGTTGCGCGTGTGGGTCTCGTACTCGACTGTGAGGCCGAAAGATCCGATTTTGAAGGTGGATCTCGATGTGGATATGTATGTTAATGATTTCATGTATGTGGGGTTTTCTGGGTCTACCCAAGGTAGCACCGAGGTGCACAGTGTTGAGTGGTGGAGTTTCAATTCCTCTTTCGATTCCGCCGCGGCTCCTGCCACAACGTCAGCACCCTCCGCCACGTCAGCACCTGAGCAGAAGGAGAGTAAGTCTTCTAGGAAGGGTACTGTGGGGGCTGTTGCTGGGGTTGTGACTGCTGGTGCTTTTGTTCTTGCTCTCTTTGCTGGTGCATTGATTTGGGTGTATTCTAAGAAGGTGAAGCGAATGAAGAAATTTGATCACTCTATTGAGTCGGAGATTATTAGAATGCCTAAGGAGTTTAGCTACAAGGAGCTGAAATTTGCCACTAAGGGGTTCAGTGCTAATAGGGTCATTGGTCATGGTGCTTTTGGGACTGTGTACAAGGGTGTGTTGCCTGAGGGTGGTGACACTGTTGCGGTGAAGAGGTGTAACCATAGTGGCCAAGGTAAGAGTGAGTTTTTGTCTGAGTTGTCTATAATTGGGAGTCTTAGGCATCGGAATTTGGTTCACCTTCAAGGTTGGTGCCACGAGAAAGGTGAGATTTTGTTGGTGTATGACTTGATGCCCAATGGGAGTTTAGATAAGGCTTTGTATGAGGCTAGGATGCCATTGTCATGGCCTCAGAGGCTCAAAATTTTGTTAGGTGTGTCATCTGTGTTGGCTTACTTGCATCACGAATGTGAAAACCAGGTAATCCATAGGGACATTAAGACTAGTAACATTATGTTAGATGAAGGGTTCAATGCTCGGTTAGGCGATTTTGGTTTAGCAAGACAAACACAACATGACAAGTCTCCTGATGCCACTGTGGCTGCTGGAACAATGGGGTACCTTGCGCCAGAGTATGTGCTTACTGGTAGAGCCACAGAGAAAACTGATGTGTTTAGCTATGGTGCTGTGGTTCTTGAGGTAGCCAGTGGGAGGAGGCCTATTGAGAAAGATGCCGCTGCAAATGGTAAAGTTGGGGTTAGCAGCAATTTGGTGGAATGGGTTTGGAGTTTGCATCAAGAAGGTAAGTTGCTAACGGCAGCTGATCCAAGGCTTGAAGGTGAGTTTGAAGAAGTGGAAATGAGGAGGGTACTCTTAGTTGGGTTAGCTTGTTCACACCCAGATTCAATGGCAAGACCAACTATGAGGGGTGCGGTTCAGATGCTGCTCGGTGAGGCTGAAGTGCCTATTGTCCCTAGAGCCAAGCCGTCTACTAGTTACAGTACTTCTCACCTCTTGTTGAGCTTGCAAGACAGTGAATCTGACTGTAATAATGCTATGATCACCATCTCTACCTCTTCCTCAGAGAACAGCCTCAGTGGTAGACATATAGTCTGA 2037 0.5012 MPPRPTPFFIVFLCFLNACSSVFATQFDFGTLTMSTLKLLGDAHLNNNTISLTGDPAVPNSAAGRALYSAPVRFRLPGSPSPASFATFFSFSVTNLNPSSVGGGLAFVISPDSTDVGDSGGLLGLQNPAAATGDGGGFVAVEFDTLMDVEFSDINGNHVGLDLNSVVSAQVSDLGSVGVELKSGDSVNAWIEYDGSSKGLRVWVSYSTVRPKDPILKVDLDVDMYVNDFMYVGFSGSTQGSTEVHSVEWWSFNSSFDSAAAPATTSAPSATSAPEQKESKSSRKGTVGAVAGVVTAGAFVLALFAGALIWVYSKKVKRMKKFDHSIESEIIRMPKEFSYKELKFATKGFSANRVIGHGAFGTVYKGVLPEGGDTVAVKRCNHSGQGKSEFLSELSIIGSLRHRNLVHLQGWCHEKGEILLVYDLMPNGSLDKALYEARMPLSWPQRLKILLGVSSVLAYLHHECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTQHDKSPDATVAAGTMGYLAPEYVLTGRATEKTDVFSYGAVVLEVASGRRPIEKDAAANGKVGVSSNLVEWVWSLHQEGKLLTAADPRLEGEFEEVEMRRVLLVGLACSHPDSMARPTMRGAVQMLLGEAEVPIVPRAKPSTSYSTSHLLLSLQDSESDCNNAMITISTSSSENSLSGRHIV* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0919 678 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 13 670 - -
Pvu6g0919 678 Pfam Legume lectin domain 25 264 IPR001220 GO:0030246
Pvu6g0919 678 MobiDBLite consensus disorder prediction 263 284 - -
Pvu6g0919 678 CDD STKc_IRAK 355 622 - -
Pvu6g0919 678 ProSiteProfiles Protein kinase domain profile. 349 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0919 678 PANTHER - 13 670 - -
Pvu6g0919 678 Gene3D - 23 268 - -
Pvu6g0919 678 Pfam Protein kinase domain 351 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0919 678 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Pvu6g0919 678 CDD lectin_legume_LecRK_Arcelin_ConA 25 256 IPR001220 GO:0030246
Pvu6g0919 678 SMART serkin_6 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0919 678 Gene3D Transferase(Phosphotransferase) domain 1 425 628 - -
Pvu6g0919 678 SUPERFAMILY Protein kinase-like (PK-like) 331 658 IPR011009 -
Pvu6g0919 678 Gene3D Phosphorylase Kinase; domain 1 310 424 - -
Pvu6g0919 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Pvu6g0919 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 257 IPR013320 -
Pvu6g0919 678 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0919 Pvu-Chr6 20646236 20648272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0919 8 662 Receptor kinase-like Gene Family AT3G53380 64.306 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu6g0919 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0919 - - var:108341139 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0919 6 20646236 20648272 Pvu8g2479 8 55391513 55394391 PCT