Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0918 ATGGTTCTCTCCAAAACCGCCTCCGAATCCGACGTTTCTGTCCACTCTACCTTTGCTTCTCGTTATGTCAGAACTTCACTTCCCAGGTTCAGGATGCCTGAGGAGTCGATTCCAAAGGAAGCAGCGTATCAGATCATCAACGATGAGTTGATGTTGGATGGGAACCCAAGGTTGAACTTGGCTTCCTTTGTGACGACATGGATGGAACCTGAGTGCGATAAACTCATCATGGCTTCCATCAACAAGAACTATGTGGACATGGATGAGTACCCTGTCACCACTGAGCTTCAGAATCGATGTGTGAACATGATAGCTCATCTTTTTAATGCACCACTACAAGACTCTGAAGCTGCTGTTGGTGTTGGCACGGTCGGTTCATCAGAGGCCATAATGTTGGCTGGATTGGCATTCAAAAGGAAGTGGCAAAACAGAAGGAAAGAAGAGGGAAAGCCTTATGACAAACCCAACATTGTCACTGGAGCCAACGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAGGAAGTGAAGCTGCGTGATGGATACTATGTAATGGACCCTGACCAAGCTGTGGAATTGGTGGATGAGAACACTATTTGTGTAGCAGCTATCCTTGGTTCCACACTAAATGGAGAGTTTGAGGATGTCAAACGCCTCAATGATCTTCTCGTTGAAAAGAATAAGCAAACTGGGTGGGACACTCCTATTCATGTTGATGCAGCCAGTGGTGGCTTCATTGCCCCATTTATTTACCCAGAGCTTGAGTGGGACTTCCGATTACCACTAGTGAAGAGCATCAATGTTAGTGGGCACAAGTATGGTTTGGTGTATGCTGGAATCGGTTGGATTATCTGGAGAAGCAAGGAGGACTTGCCTGAGGAACTCATCTTCCATATCAACTATCTCGGAGCTGATCAACCCACCTTCACACTTAACTTCTCCAAAGGTTCCAGCCAAGTCATTGCTCAATACTACCAACTAATTCGCCTTGGTTATGAGGGCTACAGAAACGTGATGGAAAATTGCAGAGACAACATGTTGGTGCTGAAAGAGGGTCTCGAGAAGACAGGGCGGTTTACCATTGTGTCCAAAGACGATGGTGTGCCTTTGGTGGCTTTCACCCTGAAAGATCATACCCACTTTAACGAGTTCCAAATCTCTGATATGCTGAGGCGATTTGGATGGATTGTGCCAGCATACACCATGCCCCCAGATGCTCAACATGTTACAGTGCTTCGTGTTGTCATCAGGGAGGACTTCTCAAGAACCCTTGCAGAGCGTCTAGTGGCAGATGTGGAAAAGGTGGTGCATGAGCTTGATGCCCTTCCAGTAAGGGTGATAAGTAGCTCCAGTGTGACAGTCAACACAGAAGAAAATGGCAAAGTGGTTAAGAAGAGTGCTCTGGAGACACAGAGAGAAATCACAGCGATTTGGAGGAAGTTTGTGTTGGAGAGGAAGAAGCTCAATGACAAGATGAGTGGTGTTTGCTAG 1506 0.4655 MVLSKTASESDVSVHSTFASRYVRTSLPRFRMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLQDSEAAVGVGTVGSSEAIMLAGLAFKRKWQNRRKEEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPDQAVELVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKQTGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWIIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMLVLKEGLEKTGRFTIVSKDDGVPLVAFTLKDHTHFNEFQISDMLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVADVEKVVHELDALPVRVISSSSVTVNTEENGKVVKKSALETQREITAIWRKFVLERKKLNDKMSGVC* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0918 501 Gene3D - 1 65 - -
Pvu6g0918 501 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pvu6g0918 501 Gene3D - 66 360 IPR015421 GO:0003824
Pvu6g0918 501 PANTHER GLUTAMATE DECARBOXYLASE 1 501 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pvu6g0918 501 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Pvu6g0918 501 Gene3D - 361 448 - -
Pvu6g0918 501 PANTHER GLUTAMATE DECARBOXYLASE 1 501 - -
Pvu6g0918 501 CDD DOPA_deC_like 59 439 - -
Pvu6g0918 501 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0918 Pvu-Chr6 20637379 20644075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0918 1 501 Calmodulin-binding Proteins AT5G17330 83.992 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0918 K01580 - gmx:100796533 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0918 6 20637379 20644075 Pvu6g0918 6 20637379 20644075 ECH
Pvu6g0918 6 20637379 20644075 Pvu8g2480 8 55396605 55399774 PCT