Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0912 ATGAATATGGCTCCTGTTTCACTGCCTCCTGGGTTTAGGTTCCACCCCACAGATGAAGAACTTGTTTCTTATTACCTCAGAAGAAAGATAAATGGTCGTAAGATTGAACTAGAGATCATCCCTGAAGTTGATCTTTATAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTCAGCCCTCGAGATAGAAAATACCCAAATGGATCAAGAACAAATCGTGCAACCAAATCTGGGTACTGGAAAGCCACAGGGAAAGACCGTAAGGTGAATTCTCAGAATTGTGCAATAGGAATGAAGAAAACCCTAGTTTACTATCGAGGTAGGGCACCACATGGTTGTCGCACAGGTTGGGTTATGCATGAGTACCGTCTTGATGAGACACAGTGTGAAACCAATACAGGCTTGCAGGATGCATATGCTCTTTGTCGTGTGTTCAAGAAGACTGCAGTGATTCCTCCAAAAGTTGGAGATCAACACTATGTTAATGTGAGCACCAGCCATGCAAATCAGATAATTGCAAGTGATCAATCATCAAGCATTAACGAGCTATACTCTGAAGGTAGAGGTGAAGTTTTAGAGAGCTCAAATTATTTTATGTCAATGGATACATCCCCAAACATAAATGGAACTGCTTTCAATATCAATGGTGGAAGAAGGGATAATGAGACAGCATGGTCACATTTCTTATCAGAAGACTTGCTCAATCTTCCAACAGCATCCACTTCTTCATTTCCCAATTATGGATCCATGAGCTATCCTCCATCAAAGGTGGATGTAGCACTGGAGTGTGCAAGGATGCAGCATAGGTTTAGCATGCCTCCATTGCAGATGCAGGACTTGGACTTCCCTCAAGTTGGCATTTCCAAGCTGAAGATGGAACAAGGATCGAGTTCCATGAGTGGAAGCAGAAATGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCGCAGGAGTTAATAAATCAATCCAACTACTCATCACAACCATTCATGAATGCCAATGAAAATTATGCTCCTCATGAAACTGACTTTACTTTTATGGTTGGTACCAATTACAATCATGTCAACGATATGAACACCATGAACATGGGATTTGTTGACAAAGCATGGGAAGACAAAAACACAAGATCAATTGAGATTGGAGATCTTGATGATGGATTCAAGACAGAGAGGATGATGGAGAATTTAAGATGGGTGGGAATGTCCAGCAAAAATGTGGAAAAGAGCTTTATGGAAGAGCAGCAAAATATTGTTCCAATTGATGATATCTCAAACTTCCAAACTAATACGGAAGAAAACGAACTGAAAGTAGGATTTGAGAAACACAGTTGCAACAAAGAAATAACCGATACTGAGATTGATGATTTTTCAATGGGATTCATGAATGATGAAGACCCCAATGAGAACTTCCTAAATGAGGAAAACATTGACTATTCAAATTCTACAAACTATGATGTTGTTGAGGAAACAAAAACCAATCATGCGATGTTTGTCTCAACTCATCAAGTAGCTGATACATTCTTTCATCAAATAGCTCCTTCACAAACCGTCAAAGTTCAACTCAATCCAGTAATGGCTGCCAATCAATGTATAGAGAAAGCAACAGTCAAGAAAGGACCCTCTTTCTTTAGAAAGTTTAAGGCCTGTGTGACAGGGAAGCTAATAAAGCCATCAAACACAGTAGCAAGTGTTCTTGAATTCATCTTTGCATTTTTGTTGATGCATTGTGTTTTTTTAAAGGGATTAGTGGAAGATTGGAAACCAGACCTTAAACGTTGTGGCTGTGTTTACAGCATGAAGAATATGGGAGAAGCAACAGAGAGTGTGCCTAGGAATGAACAAGAAAAGGTTTGGTTTGTTGGTATCAGATATGGGAAAGGATTTAGCATGGTCCTAAAGAAGATAAGCATTTTCCTCACTATATCATTGGCTCTGTTCACCATGTGGGCTAACCATATCATAGTTGACTCTTAG 2016 0.3973 MNMAPVSLPPGFRFHPTDEELVSYYLRRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQNCAIGMKKTLVYYRGRAPHGCRTGWVMHEYRLDETQCETNTGLQDAYALCRVFKKTAVIPPKVGDQHYVNVSTSHANQIIASDQSSSINELYSEGRGEVLESSNYFMSMDTSPNINGTAFNINGGRRDNETAWSHFLSEDLLNLPTASTSSFPNYGSMSYPPSKVDVALECARMQHRFSMPPLQMQDLDFPQVGISKLKMEQGSSSMSGSRNETDILQEILSVAHASQELINQSNYSSQPFMNANENYAPHETDFTFMVGTNYNHVNDMNTMNMGFVDKAWEDKNTRSIEIGDLDDGFKTERMMENLRWVGMSSKNVEKSFMEEQQNIVPIDDISNFQTNTEENELKVGFEKHSCNKEITDTEIDDFSMGFMNDEDPNENFLNEENIDYSNSTNYDVVEETKTNHAMFVSTHQVADTFFHQIAPSQTVKVQLNPVMAANQCIEKATVKKGPSFFRKFKACVTGKLIKPSNTVASVLEFIFAFLLMHCVFLKGLVEDWKPDLKRCGCVYSMKNMGEATESVPRNEQEKVWFVGIRYGKGFSMVLKKISIFLTISLALFTMWANHIIVDS* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0912 671 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Pvu6g0912 671 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 3 338 - -
Pvu6g0912 671 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Pvu6g0912 671 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Pvu6g0912 671 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 338 - -
Pvu6g0912 671 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0912 Pvu-Chr6 20583501 20587952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0912 3 662 NAC Transcription Factor Family AT1G65910 43.149 2.19e-162 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu6g0912 NAM 2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0912 - - gsj:114381841 1028.47