Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0908 ATGGGTTCTTGGTCTAGAGTATCTGTTTTGACTATTCCATGGTCTACAATCAATGCTGAATCTGCTATGGACTCTAAATTAGGCACTGTTTTTTATAAAATTTACAGAAATACATATAAAAGAAATCTCAGTCTCTCTTTTTCTTGGGATAATCGTAAACTTAGGAGTATTGGTGTGATTAAATCAAGCCAAGATGTATCTTATTTTCAAACCGAACAAGAAGTAGGAACTTGGGAAGAACCAGATACTGGCAGTGACAGTGAGTCTGATGGCGAGGAAGTTGAAGACCACTTTGTATTTGCAAGTGATGGAATGAAGACGTCAGTTGTTGCTGATGTTAATATAACTTCAGGGGACAACTACGAGGAACTTATTAAGAAAGAGGTTGAACAGCTTTTGGAACCAGAAGAAAGAGCAATATTGCAACAGAATGTTACTCCTAACTTGGAAAAAATATCAACTGAAAAATGGAGCCCGCTGCACACTCTTGTGCTATCAATGCAGATGAGTTGCGTGGATAAGCTTCTTGATAATGGCATTGACATTGATTTACCTGATAAGGAAGGTCTTACTGCACTTCATAAGGCAATTATAGGTAAAAAAGATACTTTGATTAGCCACCTTTTACGGAGACGTGCAAGTCCACATGTTAAGGATAAGGATGGAGCCACTCCACTTCATTATGCAGCTCAAGTTGGTGCCAAAATGACTGTGAAATTATTGATCAAGTACAAGGCTGATGTCAATGTTGAAGATAACGAAGGTTGGACCCCCTTGCACGTTGCCATTCAAAGCAGAAATAGAGATTTAGCAAAAATTTTGTTAGTCAATGGTGCTGATAAGACAAGGAAAAATAAGGACGGAAAAACAGCCCTGGATCTGAGCTTTTGTTATGGGAAAGATTTTAAGTCTTATGAACTTGCCAAATTACTGAAGACGGTTCCAGCGGATAGCTGTCTATGA 963 0.3842 MGSWSRVSVLTIPWSTINAESAMDSKLGTVFYKIYRNTYKRNLSLSFSWDNRKLRSIGVIKSSQDVSYFQTEQEVGTWEEPDTGSDSESDGEEVEDHFVFASDGMKTSVVADVNITSGDNYEELIKKEVEQLLEPEERAILQQNVTPNLEKISTEKWSPLHTLVLSMQMSCVDKLLDNGIDIDLPDKEGLTALHKAIIGKKDTLISHLLRRRASPHVKDKDGATPLHYAAQVGAKMTVKLLIKYKADVNVEDNEGWTPLHVAIQSRNRDLAKILLVNGADKTRKNKDGKTALDLSFCYGKDFKSYELAKLLKTVPADSCL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0908 320 MobiDBLite consensus disorder prediction 72 93 - -
Pvu6g0908 320 Pfam Ankyrin repeats (3 copies) 204 285 IPR002110 GO:0005515
Pvu6g0908 320 ProSiteProfiles Ankyrin repeat profile. 254 286 IPR002110 GO:0005515
Pvu6g0908 320 ProSiteProfiles Ankyrin repeat profile. 221 253 IPR002110 GO:0005515
Pvu6g0908 320 Pfam Ankyrin repeats (many copies) 157 198 IPR002110 GO:0005515
Pvu6g0908 320 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 74 313 - -
Pvu6g0908 320 Gene3D - 119 221 IPR036770 -
Pvu6g0908 320 ProSiteProfiles Ankyrin repeat profile. 155 187 IPR002110 GO:0005515
Pvu6g0908 320 Gene3D - 222 301 IPR036770 -
Pvu6g0908 320 ProSiteProfiles Ankyrin repeat region circular profile. 254 280 - -
Pvu6g0908 320 PANTHER ANKYRIN REPEAT AND SOCS BOX PROTEIN 3 74 313 - -
Pvu6g0908 320 ProSiteProfiles Ankyrin repeat profile. 188 220 IPR002110 GO:0005515
Pvu6g0908 320 MobiDBLite consensus disorder prediction 79 93 - -
Pvu6g0908 320 SMART ANK_2a 254 283 IPR002110 GO:0005515
Pvu6g0908 320 SMART ANK_2a 287 320 IPR002110 GO:0005515
Pvu6g0908 320 SMART ANK_2a 221 250 IPR002110 GO:0005515
Pvu6g0908 320 SMART ANK_2a 188 217 IPR002110 GO:0005515
Pvu6g0908 320 SMART ANK_2a 155 184 IPR002110 GO:0005515
Pvu6g0908 320 ProSiteProfiles Ankyrin repeat region circular profile. 221 253 - -
Pvu6g0908 320 SUPERFAMILY Ankyrin repeat 147 311 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0908 172 280 Ion Channels AT2G25600 30.000 9.35e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0908 - - gsj:114380843 515.383