Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0886 ATGTTTGAACTAAAGCTAATTGTCTTAACTATGATGTTGTGGAGCAATATTGTAGAACATGGTGCAACGGGTGATCCACAGACACGTATGATAAACAGTGGGTGCAGCACATACAACGCTACCAACTTGCAGAGTTTCCATGCCAATATCAACGCAACATTTTCAGAGCTTAGAGGAGATATTATAAATGACAGCAAGCACTTTGGCACAACACAGCAAGCCACAGGAGATGTTCTCACCTTTGTTATGTTTCAATGCAGAAACTATCTCTCCAACAATGATTGTCTTTCTTGCTTCAACACCGCCTCAACCCAAATCCGCAACTGCTCCGCCGCCAACGGCGCCAGAGTCATCTACGACGGTTGCTTCCTCAGGTATGAGAGCGAGAGGTTCTTCGACCAGACAAATGAAGTTGGCAATGGTGTATCATGTGGAAACATCACTTCAAATGCCACTGGTTTTATATCAGTTGGACAACAAGTTATTTGGGATATCCAAAGAGCAACACCAAAAACCAAAAGGTTTTATGCAGCTACTAAGACAGAGGTGGCTGGTGGTAGTGCAATTTATGCTGTTGCACAGTGTGTTGAAACTGCAACTGAGGATAAATGTCTGAGTTGCATGCAAGTTGGATACAACAACTTACAAAGTTGTCTTCCCAAAACAGAGGGAAGAGCATATGATGCTGGCTGTTTCATGAGATACTCCACCACACCTTTCTTTGCTGATAATCAAACCATTGATATTGCACCCTTTTTAAAACAAGGAGATTCAAGCAAGAAGTGGGCTATAATTGGTGGCAGTGTTGGAGGATTTGTTGTTCTCCTCTGTGTGTTGTTTGCATGGCTATGGTTTACAAAACCAAAGAGGGTTCCTAGAGGTGACATATTGGGAGCAACAGAGTTGAAAGGTCCAGTTAACTACAAGTATAATGATTTGAAAGCTGCAACCAAAAAATTCAGTGCTGAAAACAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCCGTAAAAAAACTAGTTTTGGGGAAATCAAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTAGTTAGACTTCTTGGTTGTTGCAGCAAAAGTCAAGAGAGAATCCTGGTTTATGAGTATATGGCAAATAGCAGTCTTGACAAATTCTTATTCGGTAATAGAAAAGGTTCCCTGAGTTGGAAACAACGCTATGATATAATTTTAGGCACAGCAATGGGACTGGCATATCTGCATGAGGAGTTCCACGTATCCATCATACATAGAGATATCAAGACTTCTAATATCCTCTTGGATGATGATCTCCAACCCAAAATTGCTGATTTTGGATTGGCAAGGCTTCTGCCAGAGGATCATTCCCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATACATGGTCAATTATCCGAGAAGGCTGATACCTACAGTTATGGTATTGTAGTCCTAGAAATCATTAGTGGTCAAAAGAGTACTGATGTGAAGGGTGACGAGGATGGTCATGAATACCTACTTCAACGAACATGGAAACTGTATGAGAGAGGCATGCACTTCGAGCTGATGGACAAGGCCATAGAGCCTAATGAGTATGAAGCAGAGGATGTTAAGAAGATTATAGAAATTGCACTGTTGTGCACTCAGGCATCAGCTGCAACGAGGCCAACAATGTCTGAAATAGTAGTGCTACTCAAAAGCAAGAGCTTAGTGGAGCACCTGCGACCGACTATGCCTGTGTTTGTTGCAACGAATATGAAGACTCGGGAAAGCAAGTCTAGCTCAACCAGTGGCTCTTCATCTAATGCCACTGCCTCAATTTCTGTTCTATCAGCACGGTGA 1923 0.4197 MFELKLIVLTMMLWSNIVEHGATGDPQTRMINSGCSTYNATNLQSFHANINATFSELRGDIINDSKHFGTTQQATGDVLTFVMFQCRNYLSNNDCLSCFNTASTQIRNCSAANGARVIYDGCFLRYESERFFDQTNEVGNGVSCGNITSNATGFISVGQQVIWDIQRATPKTKRFYAATKTEVAGGSAIYAVAQCVETATEDKCLSCMQVGYNNLQSCLPKTEGRAYDAGCFMRYSTTPFFADNQTIDIAPFLKQGDSSKKWAIIGGSVGGFVVLLCVLFAWLWFTKPKRVPRGDILGATELKGPVNYKYNDLKAATKKFSAENKLGEGGFGDVYKGTLKNGKVVAVKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKSQERILVYEYMANSSLDKFLFGNRKGSLSWKQRYDIILGTAMGLAYLHEEFHVSIIHRDIKTSNILLDDDLQPKIADFGLARLLPEDHSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTDVKGDEDGHEYLLQRTWKLYERGMHFELMDKAIEPNEYEAEDVKKIIEIALLCTQASAATRPTMSEIVVLLKSKSLVEHLRPTMPVFVATNMKTRESKSSSTSGSSSNATASISVLSAR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0886 640 SUPERFAMILY Protein kinase-like (PK-like) 303 592 IPR011009 -
Pvu6g0886 640 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 13 637 - -
Pvu6g0886 640 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Pvu6g0886 640 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 637 - -
Pvu6g0886 640 CDD STKc_IRAK 326 593 - -
Pvu6g0886 640 ProSiteProfiles Protein kinase domain profile. 320 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0886 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Pvu6g0886 640 Gene3D Transferase(Phosphotransferase) domain 1 397 605 - -
Pvu6g0886 640 Gene3D Phosphorylase Kinase; domain 1 296 396 - -
Pvu6g0886 640 Pfam Protein tyrosine and serine/threonine kinase 322 591 IPR001245 GO:0004672|GO:0006468
Pvu6g0886 640 Gene3D - 138 240 IPR038408 -
Pvu6g0886 640 Gene3D - 27 131 IPR038408 -
Pvu6g0886 640 MobiDBLite consensus disorder prediction 616 640 - -
Pvu6g0886 640 SMART serkin_6 320 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0886 640 Pfam Salt stress response/antifungal 35 128 IPR002902 -
Pvu6g0886 640 Pfam Salt stress response/antifungal 152 237 IPR002902 -
Pvu6g0886 640 ProSitePatterns Protein kinases ATP-binding region signature. 326 349 IPR017441 GO:0005524
Pvu6g0886 640 ProSiteProfiles Gnk2-homologous domain profile. 135 240 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0886 Pvu-Chr6 20317163 20321168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0886 1 640 Receptor kinase-like Gene Family AT1G70520 37.082 9.97e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu6g0886 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0886 - - gmx:100801131 977.237