Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0883 ATGCTGCAACTTAAGCTACTGGTCTTAACCTTGATATGGTGGAGTTATAATAATTTTCATGCATATGGTGCAGTTGAAAATTCTCAGACAAATTTACTGAACAAGGGGTGCAGTGCATACAATGCATCCAACTTGCGTAGCTTCTTTGCTAATATGAATGAAACGTTTGAAAGCCTGAGAGCACAGATTAGCAATGATAAGAACAGGCACTTTGCCGTAGAAGATAAAGCCAGGGGAGAGGTGCTCACATATGCTATGTTTCAATGCAGAAACTATCTCTCCAAAACTGAATGTCTTGCTTGCTTCAACACTGCCACCTCTCAAATCCGCAACTGCTCTGCTGCTAATGGCGCCAGAATCATATACGACTCCTGCTTCCTCAGGTATGAGAGCGACAGGTTCTACGATGAAACCAATGAACCTGGCGGTGGTGTATCATGTGGGAACACGAGTTCAACCGTCACTGGTTTTAGAGTAGCTGTACAGCAGGTGTTAATGGAGCTCCAAGAAGCAACACCAAAAATTAAAGGTTTTTATGCAGCTACAAAGACACCGGTTGTTGGTGGTAGTGCAATTTATGCCGTTTCACAGTGTGTTGAAACAGCCATAAAGACTAATTGTCTGAACTGCATGCAAGTTGCATTTAACAACTTACAACGTTGTCTTCCCAACACAGATGGAACAGCATATGATGCTGGCTGTTTTATGAGATACTCCACCACATCTTTCTTTGCTGATAATCAAACCATTGATATTGCACCCTTTTTAAAACAAGGAGGTTCAAGGAAGAAGTGGGGTATTATAAGTGGTGTTGTTGGAGCTGTTCTTCTCCTCCTTCTTTTGATTGCTTGGAGATGGTATGGAAAATCTAAGGGGGTCCACAGAGGTGACATATTAGGAGCAACTGAGTTGAAAGGTCCAGTTAACTATAAGTATAATGATTTGAAAGCTGCAACAAAAGAGTTCAGTGCTGAAAACAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCCGTAAAAAAACTAGTTTTGGGGAAATCAAGCAAGATGGAGGATGATTTTGAAGGCGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTAGACTTCTTGGTTGTTGCAGCAAAGGTCAAGAGAGAATCTTGGTTTATGAGTATATGGCAAATAGCAGTCTGGACAAATTCTTATTCGGTCACAGAAAAGGTTGCCTCAGTTGGAAACAACGCTATGATATAATTTTAGGCACAGCAAGGGGACTGGCATATCTGCATGAGGAATTCCACGTGTCCATCATACATAGAGATATCAAGACTGCTAATATCCTGTTAAATGATGATCTTCAGCCAAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTTCCGGAGGATCTTTCCCATCTTTGCACAAAATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATGCATGGCCTATTATCAGAGAAGGCTGATACCTACAGCTATGGCATTGTAGTCTTAGAAATAATAAGTGGTCAAAAGAGTACCGATGTGAAGGTTGATGAGGATGACAGTGAATATCTTCTTCAACGATCATGGAAACTGTACGAGAGAGGCTCTCACCTGGAGCTGTTGGAAGAGGCTATAGACCCTAATGAATATGATGCGGAAGAAGTGAAGAGAATAATAGAAATTGCTTTATTATGCACCCAGGCAACAGCTGCAACGAGGCCAACAATGTCTGAAGTAGTAGTATTGCTCAAAAGCAAGAACTCAGTGGAGCACATGCGACCAACTATGCCTGTGTTTGTTGGAACGAATGTGATGACTCGGGAAGGCAACTCTACTAGTTCATCTAATGCTACTGCTTCCATTTCTATTGCATCAGCTCGATGA 1917 0.4152 MLQLKLLVLTLIWWSYNNFHAYGAVENSQTNLLNKGCSAYNASNLRSFFANMNETFESLRAQISNDKNRHFAVEDKARGEVLTYAMFQCRNYLSKTECLACFNTATSQIRNCSAANGARIIYDSCFLRYESDRFYDETNEPGGGVSCGNTSSTVTGFRVAVQQVLMELQEATPKIKGFYAATKTPVVGGSAIYAVSQCVETAIKTNCLNCMQVAFNNLQRCLPNTDGTAYDAGCFMRYSTTSFFADNQTIDIAPFLKQGGSRKKWGIISGVVGAVLLLLLLIAWRWYGKSKGVHRGDILGATELKGPVNYKYNDLKAATKEFSAENKLGEGGFGDVYKGTLKNGKVVAVKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDKFLFGHRKGCLSWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTANILLNDDLQPKIADFGLARLLPEDLSHLCTKFAGTLGYTAPEYAMHGLLSEKADTYSYGIVVLEIISGQKSTDVKVDEDDSEYLLQRSWKLYERGSHLELLEEAIDPNEYDAEEVKRIIEIALLCTQATAATRPTMSEVVVLLKSKNSVEHMRPTMPVFVGTNVMTREGNSTSSSNATASISIASAR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0883 638 Gene3D Phosphorylase Kinase; domain 1 296 398 - -
Pvu6g0883 638 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Pvu6g0883 638 SMART serkin_6 322 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0883 638 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Pvu6g0883 638 CDD STKc_IRAK 328 595 - -
Pvu6g0883 638 Pfam Protein tyrosine and serine/threonine kinase 324 592 IPR001245 GO:0004672|GO:0006468
Pvu6g0883 638 Gene3D - 28 134 IPR038408 -
Pvu6g0883 638 Gene3D - 145 243 IPR038408 -
Pvu6g0883 638 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 21 630 - -
Pvu6g0883 638 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 630 - -
Pvu6g0883 638 SUPERFAMILY Protein kinase-like (PK-like) 310 621 IPR011009 -
Pvu6g0883 638 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Pvu6g0883 638 Gene3D Transferase(Phosphotransferase) domain 1 399 608 - -
Pvu6g0883 638 MobiDBLite consensus disorder prediction 618 638 - -
Pvu6g0883 638 Pfam Salt stress response/antifungal 151 240 IPR002902 -
Pvu6g0883 638 Pfam Salt stress response/antifungal 41 131 IPR002902 -
Pvu6g0883 638 ProSiteProfiles Protein kinase domain profile. 322 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0883 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0883 Pvu-Chr6 20296013 20299232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0883 37 636 Receptor kinase-like Gene Family AT1G70520 37.175 8.91e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu6g0883 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0883 - - vra:106775622 1088.56