Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0875 ATGTCTAACCGAGTTTGCATAAAAAAAGGGTTGTTGACACTAATGGGTGTGAAGTTTGTGGGCATAATGGAACACCCAACTCGTTTTTCCATGTGTGTTCGATCCAAAACAACGTCTGCTCAGTATGTAGCATCGAGATTTCGAGACCCCACGTTTGAGAAACTCATGGACAACTACAAGAACCTTCTCAAGGTCATTTCCATTCAAGACCTCATCCTTGCAAACCCAAGGAATCCATCAGTCTCCATTGATTTCCTCTCCAAGCTCTCCCAGAAGCTCCACCTAAACCGCGGGCCCATTGCCTTCCTTCGCAAGTTTCCTCACATCTTCCACATTTACTATGATCATTCCAAGTTAAAGCCCTTTTGCAAGTTAACTGACGCTGCTCTCGGTGTTACACGCCAGGAAGCGGTGGCCATCAATGCTTCTTTGCCTGTTGTTGTTGAAAGACTTGTTCGGATACTGTCCATGTCAGCATCCAGAATGGTACCTCTTAGAGCTGTCTTTAAGGTTTGGAAGGAGCTTGGGCTGCCCGATGATTTCGAGGACTCTGTTATATCTGCTAATTCTGGTGTTTTTCAGCTGTGCGATGGGCATGAACAGAATACTCATTTGTTGAAGCTGGTTGATAGTGTTTCCAGCAATGGCATTAGGGCGGCTGTTGAGGATTGGAGGGTTGTAGAGTGCTGCAAAGAGGACTGCAGTGTTGATAGGATGGAAATGCAGTTCAGTTTCAAACAGGGGTATCCCCCGGGGATGAGGTTGAGCAAGAATTTCAAGGCCAAGGTGAAGGAGTGGCAGAGGTTGCCATATGTGGGGCCTTATGAAGTGCCGGGTGAGAAGAAGAAGTCTAAGGCTGGAATGATGGCCATGGAGAAGCGAGCAGTGTCGATTGTTCATGAGTTCTTGAGTTTGACAGTGGAGAAGATGGTGGAAGTTGAGAAGATCAGCCAGTTTAGGAAATGGTTTGGGATTGATTTAAATATAAGGGATCTTTTCTTGGACCACCCAGGGATCTTTTATTTGTCAACCAAGGGTAAAAGACATACTGTTTTCCTGAGGGAAGCTTATGAAAGAGGGTGTTTGGTAGAACCAAATCCTGTCTATGATGCAAGAAGACGACTACTTGATCTTGTTGTTTTAGGACGTCGGGGTCTGCCAGCTGTTAATTCGAAGTTGCAGGATTCAAGCAGCTGCAATGAGGATAGACAAGAGGAAAACCAGCAAAGACATGATTTGTCACCATCTTGA 1251 0.4556 MSNRVCIKKGLLTLMGVKFVGIMEHPTRFSMCVRSKTTSAQYVASRFRDPTFEKLMDNYKNLLKVISIQDLILANPRNPSVSIDFLSKLSQKLHLNRGPIAFLRKFPHIFHIYYDHSKLKPFCKLTDAALGVTRQEAVAINASLPVVVERLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVISANSGVFQLCDGHEQNTHLLKLVDSVSSNGIRAAVEDWRVVECCKEDCSVDRMEMQFSFKQGYPPGMRLSKNFKAKVKEWQRLPYVGPYEVPGEKKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLVEPNPVYDARRRLLDLVVLGRRGLPAVNSKLQDSSSCNEDRQEENQQRHDLSPS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0875 416 MobiDBLite consensus disorder prediction 398 416 - -
Pvu6g0875 416 PANTHER OS04G0618900 PROTEIN 21 410 - -
Pvu6g0875 416 MobiDBLite consensus disorder prediction 391 416 - -
Pvu6g0875 416 Pfam Plant organelle RNA recognition domain 48 383 IPR021099 GO:0003723
Pvu6g0875 416 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 21 410 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0875 Pvu-Chr6 20245755 20247558 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0875 - - gmx:100808404 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0875 6 20245755 20247558 Pvu6g0875 6 20245755 20247558 ECH
Pvu6g0875 6 20245755 20247558 Pvu7g2045 7 43853546 43856808 PCT