Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0846 ATTAACGAGAATGTGGCAAGGGAAATTATAAACCATAGATCTCTTCATCATCCCAATATTGTTCAGTTCATAGAAGTGGCTTTGACTCCAACACATCTTGCAATAGTTATGGAGTATGCAGCTGGTGGAGAGTTATTTTATCAAGTTCTTAACGTAGGAACAATGACAGAAGATCGAGCTCGATATTTCTTCCAGCAGTTGATTGCAGGAGTTAGTTATTGCCACGACATGGAAATATGTCATCGAGACCTGAAGTTGGAGAATACCTTATTGGATGGAAGTCCTGCAAATCGTCTTAAAATTTGTGATTTTGGCTATTCTAAGTCATGTCTACTTCATTCGAAGACTCATTCAAAGATAGGAACTCCAGCCTATATTGCACCAGAGATCATTTCTGGGAAAGGCTACTATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTAATACTTTATGCAATGCTTGTAGGAACTTTGCCATTTGAGGACAAAGCTGATCGTCAAAATCTCCGAAAAATCGTTCAGCGAGTTTTGGTTGTTCAATACGAGTTCCCCAACAATGTTTTATGCGAAGACAGTAAAAATCTGATATCTCGTATTTTTGTGGCAAATCCAGCAAAGAGAATCACCATGGAGGAAATAAAGTCACATCCATGGTTTTTAAAGAACTTGCCGGAGGAGTTAAGAGAAGGAGCTCACTATGTCTACTACAATGAAGAAAATTCAAAACATTGTCTTCAAAGTATAGAAGAGATCATGAACATTTGCAACGAAGCCAAAACCACACCTGTTGCTTCGAGTCCAAATTTATAG 810 0.3864 INENVAREIINHRSLHHPNIVQFIEVALTPTHLAIVMEYAAGGELFYQVLNVGTMTEDRARYFFQQLIAGVSYCHDMEICHRDLKLENTLLDGSPANRLKICDFGYSKSCLLHSKTHSKIGTPAYIAPEIISGKGYYGKLADVWSCGVILYAMLVGTLPFEDKADRQNLRKIVQRVLVVQYEFPNNVLCEDSKNLISRIFVANPAKRITMEEIKSHPWFLKNLPEELREGAHYVYYNEENSKHCLQSIEEIMNICNEAKTTPVASSPNL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0846 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Pvu6g0846 269 PANTHER SERINE/THREONINE KINASE 2 265 - -
Pvu6g0846 269 Pfam Protein kinase domain 3 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0846 269 SMART serkin_6 1 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0846 269 SUPERFAMILY Protein kinase-like (PK-like) 3 250 IPR011009 -
Pvu6g0846 269 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 265 - -
Pvu6g0846 269 Gene3D Transferase(Phosphotransferase) domain 1 2 266 - -
Pvu6g0846 269 ProSiteProfiles Protein kinase domain profile. 1 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0846 Pvu-Chr6 19982744 19985554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0846 3 223 CBL-interacting serine-threonine protein kinases AT2G25090 44.589 7.33e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pvu6g0846 Pkinase 4.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0846 K14498 - gmx:100787825 419.853