Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0840 ATGATGACTGACAAAGTTTACTCCAAATTCAATTGCCAATATATTATTCCATCCAGAAAACAGCTCTCCATGAAGTTCCTTTCTACTTCAGTCACTTCTTTTCTTTTTGTCATAGTGATTCTTTTCCCTTTGGTTATTGGTGATCTAAGTTCAGATAAGCAAGCCCTTCTTGATTTTGCTAATGCTATCCCCCACCGCCGAAACCTTATGTGGAATCCATCCACCTCAGTCTGTGAATCTTGGGTAGGCATCACTTGCAATGAAAATAGAACTCGTGTTGTTAATGTTCGGCTTCCTGGAGTTGGACTAGTTGGCACCATCCCATCCAATATACTTGGCAAGCTTGATGCTGTGAAAATTATTAGCCTTCGCTCCAACCTACTCAGTGGAAATCTCCCTGCTGACATTGCTTCTCTTCCTTCTCTTCAGTATCTCTACCTCCAGCATAACAACCTTTCTGGTGACATACCTGCCTCATTGTCTCCCCAACTTGTTGTACTTGATTTGTCATATAATTCCTTCTCTGGTGGCATTCCAGAGACATTTCAAAATTTTTCAGAATTAACTAGTTTGAATCTCCAAAACAACTCTCTATCCGGACAGATACCTAATCTCAATGTAACTCAGCTCAGGCTTTTGAATTTAAGCTACAACCATTTGAATGGCTCTATTCCTAAAGCTCTTCATATTTTTCCAAATTCTTCCTTTGAAGGAAACTCACTTTTATGCGGACCCCCTCTAAAGCCATGCTCTGGGGTTCCTCCTACACCTTCTCCTGCCTTGACTCCACCTCCATCATCAACTCCAGGGAGACAAAACTCAAAATACAAGTTGAGTAAAATAGCTATCATTGCAATTGGTGTTGGGGGAGCTGTGGTGTTATTCTTTATTGCTCTTGTTATTGTTATTTGCTGTTTAAAGAACGACGGCAGAGGCTCCAATGTGATTAAAGGGAAGGGCTCTAGTGGTGGCAGGGGTGAGAAGCCAAAAGAACAGTTTGGGAGTGGGGTTCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGCAGTTCTTATAATTTTGATCTTGAGGATTTGCTGAGAGCTTCAGCTGAAGTCCTGGGAAAGGGTAGTTATGGTACTGCCTATAAGGCCATACTAGAGGAGTCAATGACTGTTGTGGTGAAAAGATTGAAAGAAGTTGTGGTAGGGAAGAAGGACTTTGAACAGCAGATGGACTTTATCGGAAGAGTTGGACAACACACAAATGTGGTGCCCCTTCGCGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTATATCCCTGCTGGCAACCTGCACACACTCTTGCACGGTGGAAGGACAGGTGGAAGAACTCCCTTAGACTGGGAGTCCCGAATAAAAATATCCCTTGGAAGTGCCAAAGGACTAGCCCACATTCATTCTGTTGGTGGTTCTAAATTCACACATGGAAACATTAAGTCCTCAAATGTCCTCCTTAACCAAGATAACGATGGCTGCATTTCTGATTTTGGCCTCGCCTCCCTTATGAACGTTCCTGCTACCCCTTCTAGAGCTGCGGGTTATCGTGCTCCAGAGGTGGTTGAAACCCGTAAACACTCTCATAAATCAGATGTGTACAGCTTCGGTGTCCTCCTTCTTGAGATGCTTACCGGGAAGGCTCCTCTCCAATCTCCTGGACGTGATGACATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTAGGGAAGAATGGACTGCCGAAGTTTTTGATGTTGAGCTTATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAGATGTTGCAGATAGCCATGGCCTGTGTGGCAAAGATGCCAGATATGAGACCTAGTATGGATGAAGTAGTAAGACTGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGACCATCTTCTGAAGAAAATAAATCTAAGGACTCAAATGTTCAGACTCCATAG 1974 0.4316 MMTDKVYSKFNCQYIIPSRKQLSMKFLSTSVTSFLFVIVILFPLVIGDLSSDKQALLDFANAIPHRRNLMWNPSTSVCESWVGITCNENRTRVVNVRLPGVGLVGTIPSNILGKLDAVKIISLRSNLLSGNLPADIASLPSLQYLYLQHNNLSGDIPASLSPQLVVLDLSYNSFSGGIPETFQNFSELTSLNLQNNSLSGQIPNLNVTQLRLLNLSYNHLNGSIPKALHIFPNSSFEGNSLLCGPPLKPCSGVPPTPSPALTPPPSSTPGRQNSKYKLSKIAIIAIGVGGAVVLFFIALVIVICCLKNDGRGSNVIKGKGSSGGRGEKPKEQFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKKDFEQQMDFIGRVGQHTNVVPLRAYYYSKDEKLLVYDYIPAGNLHTLLHGGRTGGRTPLDWESRIKISLGSAKGLAHIHSVGGSKFTHGNIKSSNVLLNQDNDGCISDFGLASLMNVPATPSRAAGYRAPEVVETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEVVRLIEEIRQSDSENRPSSEENKSKDSNVQTP* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0840 657 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Pvu6g0840 657 PANTHER OS05G0588300 PROTEIN 16 657 - -
Pvu6g0840 657 PANTHER LRR RECEPTOR-LIKE KINASE 16 657 - -
Pvu6g0840 657 MobiDBLite consensus disorder prediction 632 648 - -
Pvu6g0840 657 ProSiteProfiles Protein kinase domain profile. 362 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0840 657 Pfam Protein kinase domain 365 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0840 657 SUPERFAMILY L domain-like 51 250 - -
Pvu6g0840 657 Gene3D Ribonuclease Inhibitor 49 204 IPR032675 -
Pvu6g0840 657 MobiDBLite consensus disorder prediction 632 657 - -
Pvu6g0840 657 Pfam Leucine rich repeat 107 152 IPR001611 GO:0005515
Pvu6g0840 657 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Pvu6g0840 657 MobiDBLite consensus disorder prediction 253 272 - -
Pvu6g0840 657 MobiDBLite consensus disorder prediction 316 337 - -
Pvu6g0840 657 ProSitePatterns Protein kinases ATP-binding region signature. 368 399 IPR017441 GO:0005524
Pvu6g0840 657 Pfam Leucine rich repeat N-terminal domain 50 87 IPR013210 -
Pvu6g0840 657 SUPERFAMILY Protein kinase-like (PK-like) 366 639 IPR011009 -
Pvu6g0840 657 Gene3D Transferase(Phosphotransferase) domain 1 438 656 - -
Pvu6g0840 657 Gene3D Ribonuclease Inhibitor 205 251 IPR032675 -
Pvu6g0840 657 Gene3D Phosphorylase Kinase; domain 1 330 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0840 Pvu-Chr6 19900674 19903222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0840 23 655 Receptor kinase-like Gene Family AT5G58300 66.667 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu6g0840 Pkinase 6.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0840 - - gmx:100796171 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0840 6 19900674 19903222 Pvu8g2544 8 56060979 56066448 PCT