Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0833 ATGAAAGACACAATTGAAACTCCAATGACACTCACCAGCTTGATCCGACATGTTGCTGCCAAATTCCCCTACCGTCGAGCCATCTCCGTCGCCGGAAAATTCGACCTCTCCCACTCCCGCCTCCACAGCCTGACAGAATCCGCCGCTGCTCGCTTGGTCGCCGCCGGAATCAAACCCGGCGACGCCGTCGCCCTCGTCTTCCCCAACACCGTCGAGTTTGTTGTCATGTTTCTCGCCGTCATTCGAGCGCGAGCCACAGCGGCGCCGTTAAACCCAGCTTACACGGCCGAAGAGTTCGAGTTTTACTTATCCGACTCAGATTCAAAGCTTCTAGTAACATCATTGGAAGGAAACACGCCGGCTCAAGCTGCGGCTTCTAAACTCAACATCCCTCACTCCGCTGCTTCGGTGATCCAAGGCGAAAACGAAGAAGTCGAGCTGAGTCTCTCGTTGAGCCACTCTTTTGACTCGGTTGAGTCACTCGTTAACAATGCTGATGACGTGGCGCTTTTCCTTCACACCTCAGGAACCACGAGTCGTCCCAAGGGGGTGCCGCTGACTCAGCATAACTTGTTCTCTTCTGTGCGGAACATCGACTCGGTGTACCGACTCACTGAGTCTGACTCGACGGTGATTGTGCTTCCGCTGTTCCACGTGCACGGGTTGATTGCCGCGCTGCTGAGTTCTTTAGGCGCTGGAGCATCGGTGGCGTTGCCGGCGGCGGGGAGGTTCTCCGCCTCGGCATTCTGGAAGGACATGGTTAAGTACAACGCGACGTGGTACACCGCGGTTCCTACCATACACCAGATCATACTGGATCGCCACTCTAACAACCCCGAACCGGTTTACCCGAGGCTCCGGTTCATCCGAAGCTGCAGCGCGTCTCTTGCACCGGCCATTATGGGTAAATTGGAGGAGGCTTTCAGTGCGCCAGTGTTGGAGGCTTATGCAATGACCGAAGCTTCACATCTCATGGCTTCGAACCCTTTGCCGCAAGATGGGCCCCACAAGGCGGGGTCGGTTGGGAAGCCCGTTGGCCAAGAAATGGGTATATTGGATGAATCGGGCCGGGTCATGGAGGTTGGTGTTAGTGGAGAGGTTTGTATTCGGGGACCCAATGTAACGAAAGGATATAAAAACAACGTGGAAGCTAACACGGCGTCGTTTCAGTTCGGTTGGTTTCACACCGGTGATATTGGATACTTTGATTCTGATGGGTATTTGCACCTCGTGGGTCGGATCAAGGAACTCATCAACCGCGGAGGTGAAAAGATATCACCAATAGAAGTTGATGCTATCCTTCTTTCACACCAGGACATTGCTCAAGCAGTTGCTTTCGGAGTGCCTGATCCCAAGTATGGGGAGGAGATATATTGTGCTGTCATCCCAAGAGAAGGATCACACATTGATGAGGCAGAGTTGCTAGGATACAGCAAGAAGAATCTTGCATCCTTCAAAGTCCCCAAAAAGGTTTTCTTTACTGATTCTTTGCCCAAGACTGCCACAGGAAAGATTTTGCGCCGACTTGTGGCAGAACACTTCGTCTCTCAAATTTGA 1557 0.5279 MKDTIETPMTLTSLIRHVAAKFPYRRAISVAGKFDLSHSRLHSLTESAAARLVAAGIKPGDAVALVFPNTVEFVVMFLAVIRARATAAPLNPAYTAEEFEFYLSDSDSKLLVTSLEGNTPAQAAASKLNIPHSAASVIQGENEEVELSLSLSHSFDSVESLVNNADDVALFLHTSGTTSRPKGVPLTQHNLFSSVRNIDSVYRLTESDSTVIVLPLFHVHGLIAALLSSLGAGASVALPAAGRFSASAFWKDMVKYNATWYTAVPTIHQIILDRHSNNPEPVYPRLRFIRSCSASLAPAIMGKLEEAFSAPVLEAYAMTEASHLMASNPLPQDGPHKAGSVGKPVGQEMGILDESGRVMEVGVSGEVCIRGPNVTKGYKNNVEANTASFQFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAILLSHQDIAQAVAFGVPDPKYGEEIYCAVIPREGSHIDEAELLGYSKKNLASFKVPKKVFFTDSLPKTATGKILRRLVAEHFVSQI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0833 518 PANTHER ACYL-COA SYNTHETASE 6 518 - -
Pvu6g0833 518 PANTHER OXALATE--COA LIGASE-LIKE 6 518 - -
Pvu6g0833 518 SUPERFAMILY Acetyl-CoA synthetase-like 8 516 - -
Pvu6g0833 518 Gene3D - 414 516 IPR045851 -
Pvu6g0833 518 CDD FACL_fum10p_like 23 512 IPR045310 GO:0016874
Pvu6g0833 518 Pfam AMP-binding enzyme 16 420 IPR000873 -
Pvu6g0833 518 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Pvu6g0833 518 Pfam AMP-binding enzyme C-terminal domain 429 504 IPR025110 -
Pvu6g0833 518 Gene3D - 9 413 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0833 Pvu-Chr6 19848170 19851168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0833 10 518 Monolignol Biosynthesis Gene Families AT4G05160 31.439 4.70e-60 205