Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0821 ATGTGTTTGGAACGTGGGGAGGAAGAAAGTCGAGAGAGATTGTCCGTTTTTGTGTTAGAAACAGAGCATCGATCGGAAAAGAACAGAACACAGAAGGGAATGGCCACACAGACGCAAGATTCACCTTCAAACCCTAACCCTAATCTCAATGCCACGTCATCAACGCCGTCTGCTTCATTGTTCTTTCTCGGCGCCGGTTCTTCTGCCGCTCCCGTCGCCGGCTCCGGCGAGTCACACTCTCACCACCGGCGAGCACTCTCGGAGGTCAGTTACCGGCTTCCGGACGACATGATGGACCTCTCACCGTCGGATCCGTTCAACGGCGGATCCTCGACGGCGAGCCTAGAGGAGATCGGATCCGAGGACGACCTCTTCTCCACCTACATTGACGTTGAGAAGCTCGGCGGTGGCGCGAATGGTGCCGGCCGCGGTGGAAACGGATCGGATCAGAACGGTTACGGAAACGGCACCGGAACCAGCGGACACAACGACGGCGAGAAGAGTCCGAGCGCCGAAGAGGCGCGGCCGAGACACCGGCACAGTAGCTCTGTCGACGGTTCCTCGTCGACAAGCATGTTCGGAGAGATCATGGAAGCGAAGAAAGCAATGCCTCCTGATAAGCTCGCGGAACTTTGGAACATTGATCCAAAGCGTGCCAAGAGAATACTAGCTAATCGGCAATCTGCTGCGCGGTCAAAAGAAAGAAAAGCACGCTATATACAAGAACTAGAGCGCAAAGTTCAGACCCTTCAGACCGAGGCAACAACACTTTCTGCCCAACTCACATTGTACCAGAGGGATACAACTGGTCTGAGTAGTGAAAATACCGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAGGCACAACTTCGTGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGCGAGGCATTAAACAACCACTCTGAGTCTTTCAATATTGGAATGCACCAGATGCCATTTGCAGGGTCAAATTTCTTTTCAATCCCACCACATTCAGGTCCTCTTAGTCACCAGAACATGCAGTTGCCTCCATTTGGTCTCTCCCAATCTAGCATGCCAGCTCATCAGCTGCATCAAACGAATTCTCACCAAATCTCAGATGTATTGCAAAACGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAATGGATCGTCATTTGTGAAATCTGAAGGCCCCTCAATATCTGCAAATGAGAGTAGCACTAAGTTTTGA 1251 0.5132 MCLERGEEESRERLSVFVLETEHRSEKNRTQKGMATQTQDSPSNPNPNLNATSSTPSASLFFLGAGSSAAPVAGSGESHSHHRRALSEVSYRLPDDMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGGGANGAGRGGNGSDQNGYGNGTGTSGHNDGEKSPSAEEARPRHRHSSSVDGSSSTSMFGEIMEAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEALNNHSESFNIGMHQMPFAGSNFFSIPPHSGPLSHQNMQLPPFGLSQSSMPAHQLHQTNSHQISDVLQNDQLGRLQGLDISSNGSSFVKSEGPSISANESSTKF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0821 416 MobiDBLite consensus disorder prediction 1 30 - -
Pvu6g0821 416 MobiDBLite consensus disorder prediction 144 165 - -
Pvu6g0821 416 Coils Coil 233 260 - -
Pvu6g0821 416 MobiDBLite consensus disorder prediction 31 62 - -
Pvu6g0821 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 215 278 IPR004827 GO:0003700|GO:0006355
Pvu6g0821 416 Pfam bZIP transcription factor 217 275 IPR004827 GO:0003700|GO:0006355
Pvu6g0821 416 MobiDBLite consensus disorder prediction 95 114 - -
Pvu6g0821 416 PANTHER BZIP TRANSCRIPTION FACTOR 34 413 - -
Pvu6g0821 416 MobiDBLite consensus disorder prediction 139 190 - -
Pvu6g0821 416 MobiDBLite consensus disorder prediction 394 416 - -
Pvu6g0821 416 MobiDBLite consensus disorder prediction 166 182 - -
Pvu6g0821 416 Gene3D - 216 268 - -
Pvu6g0821 416 MobiDBLite consensus disorder prediction 1 90 - -
Pvu6g0821 416 MobiDBLite consensus disorder prediction 344 372 - -
Pvu6g0821 416 SUPERFAMILY Leucine zipper domain 217 268 IPR046347 GO:0003700|GO:0006355
Pvu6g0821 416 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 34 413 - -
Pvu6g0821 416 CDD bZIP_plant_RF2 218 267 IPR044759 GO:0003700|GO:0006355
Pvu6g0821 416 SMART brlzneu 213 277 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0821 Pvu-Chr6 19712402 19715927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0821 40 403 bZIP Transcription Factor Family AT2G40620 52.577 1.18e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu6g0821 bZIP_1 4.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0821 - - gmx:100775607 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0821 6 19712402 19715927 Pvu6g0821 6 19712402 19715927 ECH
Pvu6g0821 6 19712402 19715927 Pvu8g2564 8 56251904 56255195 PCT