Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0818 ATGGACAGCGACATTTCCCGGTGGGTGATGGAGTTCCTCCTCCGCAGTTCCGTCCCCGATTCCCTAATCCAAAAAACTCTAATCGTCCTTCCTCTCTCCGGCGCTGACTCCCGCCTCAAGAAGACCCTTCTCCTCCGCATTCTTCGCACCCTCCTCCTCAAGGCCTCCCTCTCGGAAACCGCGCTCCAAATCCTCGAACTCCTCGAAGACCTGGACGGTGCCTCTGCCTCCGCCGTGCGCCGCCGCGCGTACCTCGCCGTCGCCGTCGAGTGCACTGTCAAGTACCTCGCCGCCGCCCCCGATGACGCCGACGGGGAGTTCTCTGGCGCCGTGAATCGAATCTGGCGTGGCCGTGTGGCGGCGCTGGAGGCGCGCCGGAGCGGGCTGGTGTCTGGAGAGCTGGCCCGGTGGCGGGACGACTTGGAGGCGGCGCTTGGGGATTCTAGGGCTTGCGAGAGGCTGGCGGATTTGAATAGCAGGAGGGAGGCGATGAACGAGGTGAGGGCGTATTTGAAAGAAGCGTGGGAATCGATGGGTCCTTCGTTCTTGGAATCGGTTGCGGCGATGTCGAAGGGTTTAACCAAAGAGAAAGATGATTTTGTTGTTAGTGGTAACAAGAGAGACAATGATCATGAGAATGACAATGATGCATGCATGGAGGATGTGGCAATGCATGATGAGAATCAGGGCAAGCAACAATTGGAAGAGAAAATTGATGCGAATCAGGAAGTGGGTGGGCGTGACTTGCTACTTGAGAGTGATAAAGTAATTCAGAAGCAGAATCTTCGGGTTAAACACAAGCACTCTGCACTTCGTGCATGTCATAGGGGAGTTAAAATATCTGGTTCAGAGGAAGTGGAGTCTGCAAAATCATGGAGCAAACATGATTCTGTTCCTTCTGAAATCAGAAAAGTTAGGGAATCCCTTAAATCAAGTACTTGTGAGTTAAGAGCATTGGTCAATGATCCTCTTCCTGATGCATTACGTCTATCTGAAGTTGTAAGATCAAAATTGGCAACAAGTGATACAAATATTGAGCCACCTACTGAAAACCAGAGTTCACATATAGATGTACCAGATCCAGATGTTTGCCAGAGTATTGTACCTTTTCAGCCTAATGATGCCCATCTTCGGGAGAAGTCTTCTGTTCATTGTAGTAATATACATCAGCCCAACCTAATAGAACGGAACAGAAGTGCCCGTACCATTGAGTGGGATGATTCAATAGACAACTCACCACTAGCAAGACAGTCTAGGAGGAGGAAAAGGAGATGGAGTTCGTTGGAAGAGGAGACGCTAAGGGCTGGTGTAAAAATGTTTGGAGAAGGAAACTGGGCAACAATCAGAAGTTTTTACAGTAACATATTTGACAATAGAAGTGGAGTTGATCTGAAGGACAAGTGGAGAAACATGATACGATGA 1422 0.5 MDSDISRWVMEFLLRSSVPDSLIQKTLIVLPLSGADSRLKKTLLLRILRTLLLKASLSETALQILELLEDLDGASASAVRRRAYLAVAVECTVKYLAAAPDDADGEFSGAVNRIWRGRVAALEARRSGLVSGELARWRDDLEAALGDSRACERLADLNSRREAMNEVRAYLKEAWESMGPSFLESVAAMSKGLTKEKDDFVVSGNKRDNDHENDNDACMEDVAMHDENQGKQQLEEKIDANQEVGGRDLLLESDKVIQKQNLRVKHKHSALRACHRGVKISGSEEVESAKSWSKHDSVPSEIRKVRESLKSSTCELRALVNDPLPDALRLSEVVRSKLATSDTNIEPPTENQSSHIDVPDPDVCQSIVPFQPNDAHLREKSSVHCSNIHQPNLIERNRSARTIEWDDSIDNSPLARQSRRRKRRWSSLEEETLRAGVKMFGEGNWATIRSFYSNIFDNRSGVDLKDKWRNMIR* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0818 473 Pfam Myb-like DNA-binding domain 422 471 IPR001005 -
Pvu6g0818 473 ProSiteProfiles Myb-like domain profile. 417 472 IPR001005 -
Pvu6g0818 473 CDD SANT_TRF 429 473 - -
Pvu6g0818 473 PANTHER MYB TRANSCRIPTION FACTOR 1 473 - -
Pvu6g0818 473 SUPERFAMILY Homeodomain-like 419 472 IPR009057 -
Pvu6g0818 473 PANTHER MYB TRANSCRIPTION FACTOR 1 473 - -
Pvu6g0818 473 Gene3D - 414 473 - -
Pvu6g0818 473 SMART sant 421 473 IPR001005 -
Pvu6g0818 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 417 473 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0818 Pvu-Chr6 19678046 19684491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0818 425 472 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 1.88e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu6g0818 Myb_DNA-binding 2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0818 - K11111 vun:114187915 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0818 6 19678046 19684491 Pvu6g0818 6 19678046 19684491 ECH