Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0806 ATGTATTCCAATAAAGGGTATAAAGAGGATCGCAAAGCTGAGCCTCGTTACATTGAGACCGACCCAAATGGTAGATATGCTCGGGTTGGAGATATTTTAGGAAAAGGAGCAATGAAGACAGTGTATAAAGCAATTGATGAGGTCCTTGGAATAGAGGTTGCATGGAATCAGGTCAAACTCAATGAAGCATTTCGCAAGCCAGAGGACTTGGAGCGGCTTTATTTAGAGGTTCATCTCCTCAGCACCCTCAAGCACCAATCCATCATGAGATTCTACACCTCTTGGATTGATGTCAACAATAAGACCTTCAACTTCATTACAGAAATGTTTACTTCAGGGACTCTAAGAGAATACAGGAAGAAATATAAGCACATAGGTCTGAAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAGGGTCTTGTTTATCTGCATGAACATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGATAATATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCCCAACCAGCTCACAGTGTTATAGGCACTCCCGAGTTCATGGCACCAGAATTGTACGAGGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGATTATCCATACAGTGAATGTACTAACCCTGCACAGATATACAAAAAAGTAACATCGGGGAAGCTACCAGCAGCATTTTTCAGGATTGAAGACACAGAAGCACAGAAGTTTATTGGCAAATGTCTAATAGCTGCAGCAAACAGACCATCTGCAAAAGAATTGTTGAATGATCAATTTCTTTTGTCTAATGATGCATCAGCCATGGCAAAGATTGGGATTCAGAAGCCGTTTCTAAATTACAGTGAAATGGAAACACTTCAATTGAGTGATGATTTACCTATGACTAAAATGTCAATAACTGGGAAGCTGAATCCAGAAGATGACACTATCTTTCTCAAAGTGAAAATTTCTCAGAAGGATGGTTCTTGTAGGAATGTATACTTTCCCTTTGATATTTACACAGACACCCCTATTGATGTTGCAATAGAGATGGTGAAAGAGTTGGAAATCACAGATTTGAAGCCTTCTGATATTGCAAGTATGATTGAAGGAGAGATATCTGTTCTGCTGCCGAATTGGAGGAATAGTAACTGTCCAGACACCTGGCATGCATTCAGTTATAATGATGACAAGGACAATGAAGATCCTCACCATCATTTCCACTCTGTTTCTTCTTGTTCATCATCCCAAGAGTCAACACCAGGCTTAGTCATCAGAGTTGATGACTTATTAAATGGTTGTCATTGGCTCCATGGTGATGGACTTGATGATGCCAGTTCAATATGTTCTTCACATGGGAACTCAAACTTTTGTTCAGTGGATGACCAGGAGGAACACAATAAGGCTTCTACAAAAAAAGATAAACACCCCATCATAAAGAGTCACATGTGTACTAGATTTTCCCCTAATGAAGACCCCATCACTGTGAGCCATTGCAAAATTCTAGCAGGACCACAAACACCTACTGGCAAAAGTAACAGGATGATAGACAATCGTAGACTATCTAGGAACAAGTCATTAATTGATACGAGAAGCCAGCTACTGCACAGATCACTGGTTGAGGAGATAAACAAAAGAAGATTCAAGACAGTTGGAGCTGTGGAAAATATTGGATTTGTGACACCTTATGAGGTTACCAACAAAAAGTCAAATCCAGCATGTGGTGCTCTTGATGTGAACTCTTCAAGAAGTAGGAAGGGAAAAAACTTGAAGGACAATTTTTTTTGA 1842 0.399 MYSNKGYKEDRKAEPRYIETDPNGRYARVGDILGKGAMKTVYKAIDEVLGIEVAWNQVKLNEAFRKPEDLERLYLEVHLLSTLKHQSIMRFYTSWIDVNNKTFNFITEMFTSGTLREYRKKYKHIGLKAIKSWARQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGKLPAAFFRIEDTEAQKFIGKCLIAAANRPSAKELLNDQFLLSNDASAMAKIGIQKPFLNYSEMETLQLSDDLPMTKMSITGKLNPEDDTIFLKVKISQKDGSCRNVYFPFDIYTDTPIDVAIEMVKELEITDLKPSDIASMIEGEISVLLPNWRNSNCPDTWHAFSYNDDKDNEDPHHHFHSVSSCSSSQESTPGLVIRVDDLLNGCHWLHGDGLDDASSICSSHGNSNFCSVDDQEEHNKASTKKDKHPIIKSHMCTRFSPNEDPITVSHCKILAGPQTPTGKSNRMIDNRRLSRNKSLIDTRSQLLHRSLVEEINKRRFKTVGAVENIGFVTPYEVTNKKSNPACGALDVNSSRSRKGKNLKDNFF* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0806 613 PANTHER WNK KINASE 24 593 - -
Pvu6g0806 613 SUPERFAMILY Protein kinase-like (PK-like) 29 322 IPR011009 -
Pvu6g0806 613 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 24 593 - -
Pvu6g0806 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Pvu6g0806 613 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0806 613 CDD STKc_WNK 25 285 - -
Pvu6g0806 613 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Pvu6g0806 613 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0806 613 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0806 613 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0806 Pvu-Chr6 19580077 19585087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0806 17 586 MAP Kinase Kinase Kinase AT5G58350 56.678 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu6g0806 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0806 K08867 - gmx:100778102 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0806 6 19580077 19585087 Pvu6g0806 6 19580077 19585087 ECH
Pvu6g0806 6 19580077 19585087 Pvu8g2568 8 56305123 56310513 PCT