Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0805 ATGGGTAATAACAGGTTCAGATTGTCAGATATGATGCCAAATGCATGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAAAAATGGCCCTCATGTTATGAAGAACAAAGTAATTACCTCACCAACAACCTCCCAAAGGTCACAGCCAAGATACTCTCATTGTTTCTCCATTGAACCCAACATAGCTGGTAAGTTATACAATTCTCCTATTTACACTAAGCACTCAGACAACATATTCATTGATTCACCAAGAAGGTCATCTAAAAGAAGAACTAAGAGAAAAACAATTTATAAGCCTTCTCCCACAGTTGTCTCTTCACCAGTCATAGAAAGTTTTAGTTGTCATTCCACAAATTGGATTAAGCCAAATCAACCTCAGTCTCCTGACTATTATCTCTCCTCCTCCGAGAGTTCTTCTGAATCAAACTTCCATGAGTATGTTTCATCTGAGTCTGATGAGTGTGACAAGTTCACTATTCCTGACCTGCTTAATGGAGTAGCCTCTGAATGCAGTTGCAGAGTTAGCTCTTCCACCAATGACATAATCATTGACATGAAAAATGAACCATTCACTGGAAATTGTGAAAATCTTGATGGGTTTGACACAATTTCACAATTAGGCCTTCCTCCGATATTGACAAAGCCAGTGAAGTTTGATGATAAGGTAATTGAAGCCATTGAGTTGAGGAGATCAACTAAATTTGATGAGGTAAAGTCTCATCAATCTCTAGCTGTTAAAGTTAGCAAAGAGGAAAGCAGTAGAACTAAGAGAGAGAGAAAAACCAGTCCAGTATCTAGAATTTCCTCTGCTAATTCTACAGGTATAAGACTTAGAGTGAATTCTCCAAAACTGGCAAGCAAGAAAGTTCAAGCCTATGCCAGAAGGAGTGTGTCATCCAAAGCAGGCAAGGCCTCAGTAGATACAGGTTTTCCAGAGGGATTTGCAGTTGTTAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGAGTCAATGGTGGAAATGATAGTGGAGAACAATATCCGAGCATCAAAAGATTTGGAGAACTTGCTTGCCTGCTATCTTTCACTGAACTCAAGAGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGCTCTACTTGGAATGTAA 1152 0.3906 MGNNRFRLSDMMPNAWFYKLKDMSKSRKKNGPHVMKNKVITSPTTSQRSQPRYSHCFSIEPNIAGKLYNSPIYTKHSDNIFIDSPRRSSKRRTKRKTIYKPSPTVVSSPVIESFSCHSTNWIKPNQPQSPDYYLSSSESSSESNFHEYVSSESDECDKFTIPDLLNGVASECSCRVSSSTNDIIIDMKNEPFTGNCENLDGFDTISQLGLPPILTKPVKFDDKVIEAIELRRSTKFDEVKSHQSLAVKVSKEESSRTKRERKTSPVSRISSANSTGIRLRVNSPKLASKKVQAYARRSVSSKAGKASVDTGFPEGFAVVKSSLDPQRDFRESMVEMIVENNIRASKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMALLGM* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0805 383 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 379 - -
Pvu6g0805 383 MobiDBLite consensus disorder prediction 249 265 - -
Pvu6g0805 383 ProSiteProfiles OVATE domain profile. 318 377 IPR006458 -
Pvu6g0805 383 Pfam Transcriptional repressor, ovate 322 378 IPR006458 -
Pvu6g0805 383 MobiDBLite consensus disorder prediction 249 271 - -
Pvu6g0805 383 MobiDBLite consensus disorder prediction 27 52 - -
Pvu6g0805 383 MobiDBLite consensus disorder prediction 37 52 - -
Pvu6g0805 383 Pfam DNA-binding domain 1 49 IPR025830 GO:0003677
Pvu6g0805 383 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 316 378 IPR006458 -
Pvu6g0805 383 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 379 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0805 Pvu-Chr6 19571948 19573395 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu6g0805 Ovate 4.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0805 - - gmx:100798120 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0805 6 19571948 19573395 Pvu6g0805 6 19571948 19573395 ECH
Pvu6g0805 6 19571948 19573395 Pvu8g2569 8 56312377 56313516 PCT