Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0801 ATGCCGGAGATCGACAAGGTGGCGGTGGAGGACACTGGCTTGTTCGGAAAGTACGAGCTGGGGCGTGTTATCGGGTGCGGTGCCTTCGCGAAGGTGCACTACGCGCGCAACGTGCAGACGGGGCAGAGCGTGGCCGTGAAAATCATCAACAAGAAGAAGCTCAACGGAACGGGCCTCGCCGGAAACGTGAAGCGTGAAATCACCATCATGAGCAAGCTCCACCACCCCAACATCGTGCGTCTCCACGAGGTTCTCGCCACCAAAACCAAAATCTTCTTCGTCATGGACTTCGTCCGCGGCGGTGAGCTCTTCGGGAAGATCTCGAAGGGTCGTTTCGTGGAGGATCTCAGTCGGAGGTACTTCCACCAGCTCATCTCCGCCGTCAGCTACTGCCACTCGCACGGTATATTCCACCGCGACCTCAAACCGGAGAATCTCCTCCTTGACGAGAACGGCGATTTAAGGGTCACCGATTTCGGCTTGAGTGCCGTCACGGACCAGATCCGATCCGACGGGTTGCTCCACACGCTTTGCGGAACCCCTGCCTACGTGGCACCCGAGATTTTAAGCAAAAAAGGTTACGATGGGGCCAAGGTTGATGTTTGGTCTTGCGGGGTCGTTTTGTTCGTCCTCGCCGCGGGTTACTTACCGTTTAACGATCCGAATTTGATGGTAATGTATAAGAAGATTTACAAGGGAGAGTTCCGGTGCCCGCGGTGGATGTCGCCGGATCTCCGACGCTTTTTGTCGAAGCTTCTAGACACCAACCCAGAAACGAGGATCACGTTGGACGGCATGCTTCAAGATCCGTGGTTCAAAAAAGGGTACAAAGAGATAAAATTTAACGAGGAGGATTACATGACCAGGTCGTGTATAGGGCCCAAAGACGAGCGGATCATTAATTTGAACGCTTTTGACCTAATATCTTTCTCTTCGGGTTTGAATTTGTCGGGGCTGTTCGGGGACGCCGGCGAGGGGGAGCGGTTGGTGACGCGGAAGTCGCCGGAGAAGGTGCTGGAGATGGCGGAGGAGGCGGGGGCGGCTGCGGATATGGAGGTGCAGCGTAAGAAGGATTCCGGGGTGAAGTTAGAAGGGCTCAATGGGCAGTTCGGGTTTGAGGTGGAGGTTTACCGGCTCACGGCGGAGCTCACGGTTGTGGAAGTCCGGAAGAATTGCGGCGATGCCGTGCCGATTAATAACGTGTGGGAGGAGAAGTTGAAGTCTTCGTTGCTCGGAGGTGCGACGACGTCGTATAACAGCGAAGAGCAAAATCAACAACAACAACCTGAGTCGCAGGAGGTGGCCGGTGACTGA 1314 0.5533 MPEIDKVAVEDTGLFGKYELGRVIGCGAFAKVHYARNVQTGQSVAVKIINKKKLNGTGLAGNVKREITIMSKLHHPNIVRLHEVLATKTKIFFVMDFVRGGELFGKISKGRFVEDLSRRYFHQLISAVSYCHSHGIFHRDLKPENLLLDENGDLRVTDFGLSAVTDQIRSDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPNLMVMYKKIYKGEFRCPRWMSPDLRRFLSKLLDTNPETRITLDGMLQDPWFKKGYKEIKFNEEDYMTRSCIGPKDERIINLNAFDLISFSSGLNLSGLFGDAGEGERLVTRKSPEKVLEMAEEAGAAADMEVQRKKDSGVKLEGLNGQFGFEVEVYRLTAELTVVEVRKNCGDAVPINNVWEEKLKSSLLGGATTSYNSEEQNQQQQPESQEVAGD* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0801 437 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 433 - -
Pvu6g0801 437 MobiDBLite consensus disorder prediction 413 437 - -
Pvu6g0801 437 CDD CIPK_C 303 410 - -
Pvu6g0801 437 Gene3D Kinase associated domain 1, KA1 303 412 - -
Pvu6g0801 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pvu6g0801 437 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0801 437 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0801 437 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0801 437 SUPERFAMILY Protein kinase-like (PK-like) 15 282 IPR011009 -
Pvu6g0801 437 Pfam NAF domain 301 354 IPR004041 GO:0007165
Pvu6g0801 437 PANTHER - 1 433 - -
Pvu6g0801 437 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Pvu6g0801 437 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Pvu6g0801 437 Gene3D Transferase(Phosphotransferase) domain 1 9 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0801 Pvu-Chr6 19545613 19548315 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0801 1 411 CBL-interacting serine-threonine protein kinases AT2G30360 62.676 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu6g0801 Pkinase 4.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0801 - K12761 gsj:114377188 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0801 6 19545613 19548315 Pvu8g2574 8 56362860 56365275 PCT