Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0789 ATGGTTTCAAGGATTCACAAGAGAACAGCCATGTACAGGAACCTACAGCTGCTTCGTTCAATCAGATACTCCCACTCGCCACCTAAATCCCCAGTGTTATTGGATTTGTCAAATTGCATACAAGGTTTAAAGCAAAAGCTGCAAGAATTGAACCAATTAACGGCACGAAAAATCGCTGACTATGATCCAATGCCTAAGCTTGAAGTTGAAATGCAAGAAGAGGGTTTTGTGATAAAGGTGCTTAGTGAAAGGAGTTGCCAAGGGTTGCTGGTGTTTATATTAGAAGCCTTTGAAGAGCTGGGTCTTGATGTGCTCCAGGCTAGGGTTTCTTGTGCAGACAGCTTCAGTTTAGAAGCTTTAGGAAACAAAGAGAAGAATGAAGATACTGGTGCTTTGGATGCAGAAGTAGTTGAACAAGTAGTGTCTAAAGCTATTCAAAACTGGAGGGAAGTTTCAGAGATATGA 465 0.4151 MVSRIHKRTAMYRNLQLLRSIRYSHSPPKSPVLLDLSNCIQGLKQKLQELNQLTARKIADYDPMPKLEVEMQEEGFVIKVLSERSCQGLLVFILEAFEELGLDVLQARVSCADSFSLEALGNKEKNEDTGALDAEVVEQVVSKAIQNWREVSEI* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0789 154 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 152 - -
Pvu6g0789 154 PANTHER TRANSCRIPTION FACTOR BHLH93-LIKE PROTEIN 1 152 - -
Pvu6g0789 154 Coils Coil 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0789 Pvu-Chr6 19457795 19460226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0789 - - gmx:100527278 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0789 6 19457795 19460226 Pvu6g0789 6 19457795 19460226 ECH
Pvu6g0789 6 19457795 19460226 Pvu1g2565 1 50661012 50662813 ECH
Pvu6g0789 6 19457795 19460226 Pvu8g2266 8 53155693 53159073 ECH
Pvu6g0789 6 19457795 19460226 Pvu8g0888 8 8681290 8683120 ECH
Pvu8g0888 8 8681290 8683120 Pvu6g0789 6 19457795 19460226 ECH
Pvu6g0789 6 19457795 19460226 Pvu8g2590 8 56473497 56474936 PCT