Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0781 ATGACCACTTCTTTCTCTGACCTTCTCTCTTCTCCCACCGACCACAACCTACGAGGCTCCGAAAGACCTCAAGAGGTGTCGGATCAAACAGGTTCTTCTGGTGTGCCGAAATTCAAGTCCACACCACCTCCATCTCTCCCTTTTTTTCACCCTCAAAATCATCCTCTTCCACCCATTTCTCCTATTTCTCCTTCTTACTTTAACATCCCTCATGGGTTAAGCCTTGCTGAACTTCTTGACTCTCCAGTTCTCCTTCACTCTTCTAACGTTTTGGCATCTCCAACCACTGAATCATTTGCTACTGGTCACGGCTTCAATTGGAAGAGCAGTTATGGGGAAAGCCAGCACCATGTAAAAGAAGAAGACAAAAGCTTCTCAAGTTTCTCCTTCCAAACACAAACACAGATTCCTCTTGCATCTTCAACTGGATTTCAATCTTCAACCGGCATAGTTCAAAGCGGTTGGAGTTTCCCGGAAACTGTTAAACAAGATGGTTTTTCTTCGAGAATGAGTATGAATATGGTGAAAACTGAAACCTCTTCTGCGATGCAGGGTTTTAACTCTGAGAATAACCGCAACAGTGCTGGTTTCCAATCAGATTATAACAATTACCAGCCACAAGTTCAGACCTTAAGCAGAAGATCAGATGATGGGTACAATTGGAGGAAATATGGGCAAAAGCAAGTGAAAGGAAGTGAAAATCCAAGAAGCTACTACAAGTGCACATACCCCAATTGTCCAACAAAGAAAAAGGTTGAGAGATCCTTAGATGGACAAATTACTGAGATTGTTTACAAAGGTAGTCATAATCATCCCAAGCCTCAGGCTACCAAGAGGAACTCATTGTCTGCCTCATCACTTGCAATTTCTCATTCAAATGGTGTCAACAATGAAATAACACAAGCCCCTCATCAAATGGATTCGGTTGCAACTCCAGAAAACTCATCAATATCAATGGAAGATGATGACTTTGGTCAGAGCAAATCAGGAGGAGATGAGTTTGATAATAACGAACCTGATGCCAAAAGATGGAGAATAGAAGGTGAAAATGAGGGTATATCAGCTGTTGGAAGTAGAACAGTGAGAGAACCCAGAGTCGTGGTTCAGACAACCAGTGACATCGATATTCTAGATGATGGATACAGATGGAGGAAATATGGCCAAAAAGTAGTCAAGGGAAATCCAAACCCAAGGAGTTACTACAAGTGCACATTCCCAGGATGTCCAGTGAGGAAGCACGTAGAGAGAGCCTCACATGACCTAAGAGCAGTGATCACAACCTATGAGGGAAAGCACAACCATGACGTGCCTGCAGCACGTGGCAGTGGCAGCAACTCAATCGGAAGATCAGTGCCTATAAACACTACCACAAACAGCACCACTAGTGCAGCCACTTCTATATACATCAATTCTCATCAGAATCTCAGACCAGCAGCACCAGAAAGGACACAACACTTCAACTCCAATATGCAGCAGGGCTCAGGAAGTTTTGGATTCTCAGGGTTTGGAAATCCATTAATGGGGTCTTACATGAACCAACAATCTGACAATGTGTTCACCTCTAGAGCCAAGGAGGAGCCAGATGACTCGTTTCTTGACTCTTTGCTATGTTAA 1614 0.4349 MTTSFSDLLSSPTDHNLRGSERPQEVSDQTGSSGVPKFKSTPPPSLPFFHPQNHPLPPISPISPSYFNIPHGLSLAELLDSPVLLHSSNVLASPTTESFATGHGFNWKSSYGESQHHVKEEDKSFSSFSFQTQTQIPLASSTGFQSSTGIVQSGWSFPETVKQDGFSSRMSMNMVKTETSSAMQGFNSENNRNSAGFQSDYNNYQPQVQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQATKRNSLSASSLAISHSNGVNNEITQAPHQMDSVATPENSSISMEDDDFGQSKSGGDEFDNNEPDAKRWRIEGENEGISAVGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSNSIGRSVPINTTTNSTTSAATSIYINSHQNLRPAAPERTQHFNSNMQQGSGSFGFSGFGNPLMGSYMNQQSDNVFTSRAKEEPDDSFLDSLLC* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0781 537 Pfam WRKY DNA -binding domain 378 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 Pfam WRKY DNA -binding domain 216 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 MobiDBLite consensus disorder prediction 433 458 - -
Pvu6g0781 537 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 506 IPR044810 GO:0003700
Pvu6g0781 537 MobiDBLite consensus disorder prediction 439 458 - -
Pvu6g0781 537 SUPERFAMILY WRKY DNA-binding domain 214 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 MobiDBLite consensus disorder prediction 306 339 - -
Pvu6g0781 537 SUPERFAMILY WRKY DNA-binding domain 369 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 Gene3D WRKY domain 202 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 MobiDBLite consensus disorder prediction 266 286 - -
Pvu6g0781 537 MobiDBLite consensus disorder prediction 1 53 - -
Pvu6g0781 537 Gene3D WRKY domain 364 430 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 ProSiteProfiles WRKY domain profile. 216 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 MobiDBLite consensus disorder prediction 325 339 - -
Pvu6g0781 537 MobiDBLite consensus disorder prediction 306 323 - -
Pvu6g0781 537 SMART WRKY_cls 377 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 SMART WRKY_cls 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 MobiDBLite consensus disorder prediction 1 39 - -
Pvu6g0781 537 ProSiteProfiles WRKY domain profile. 372 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu6g0781 537 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 27 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0781 Pvu-Chr6 19393601 19396850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0781 213 536 WRKY Transcription Factor Family AT2G38470 56.056 5.74e-107 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu6g0781 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0781 K13424 - gmx:100127397 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0781 6 19393601 19396850 Pvu6g0781 6 19393601 19396850 ECH
Pvu6g0781 6 19393601 19396850 Pvu8g2599 8 56596899 56600140 PCT