Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0778 ATGGAGAGTCAAATTTCAAATGAATTGATTTCTTCTGGAATGATTGGAAATGATAAATTAGTATGTCAATATGCTATAAAACACACGACTAAAGGTGTTTGGTATGGAGATAATCCCTTTCATCATGGCACGCCTATCATACTAATTCAAATTGTTCTTATGTGGGCTGCTGGTAGAATCACTTATTTCTTATTGAGGCCTTGTCATCAAACCCTTATTATTTCACAAATTCTGGCTGGAGTCATATTGGGTCCTATAGTTCTAGGTCGGCACAAGTCAACTCATGAAATGCTATTTCCAATAGAAAGCCAAATGACTCTGACAACATTTGTTGAATTTGGCATGATTATCCATTTCTTTAAGATGGGGGTGCAAATCGATCCCAGGCAAATCTTGAAGATTGAAAAGCAAGCAATAGTAATTGGTTTAACTGGTCACATGTCTTCTTTAGTACTTAGTGGTGTAGTTTTCAATATTGTTGGATCAATCTACCCTGAGGAAACTACAGACCCTAGTGTTCACGTTTTGGTGATATCATCTTCTGTGACTTCATTTCCTGTTGTTAGTAACTTTCTAACGGAGATGAATATCATAAACTCAGAGGTTGGACGCATAGCTGTATCCACTTCCATGGTTAGTGATTCATGCATGTGGATATTGTATTTTGTGGTAATCAATGGTGCTAAAGCAATTAAACACGAAACATATAAACCTTTTACAGAAATAATTGTGTCAATTAGTTATTTCGCCTCTTTATACTTCCTTCTAAGGCCATTGGTTATATGGATCTCCAATCGTAATCCACGAGGAAAACCTATGACAGAAAGTCATTTTTTGACTATCATTTGTATACTTTTGCTGGTTGGATTGACTGCAAGTATTGCAGGACAACCTCCTTTCGTTGTTGCCTTTTGTTTTGGGTTGATCTTACCGGATGGTCCCCCTTTAGGATCTGTTCTGACAGAAAGGCTTGACACTGTTGGTTCTACTTTGATGGTTCCATCTTATTGTACTATTATAGGCCTTAAAACCAGTCCTTATGCAGTAGCAGAAACCAAGTCAATAACCATTGAGATTATCTTAATTTCAATGTATGTAGGGAAGTTTCTGGGCACCATTTTACCCTCACTTCACTTTCAAATTGAATTTTGGGATTCTTTTGCATTGGCTGTAATCATGTGCTGCAAAGGCCTCATGGATCTCTGCTTCCTCGACTTATTATTGAGTGTTAAGGCAATAGGAGAGCAACCTTTCACCCTTGCTATATTTACCATGGTGGTCGTAACTGGTTCTGCAAGTCTATATGTTTATCACATGTATGATCCTTCAAGGAAGTATAGATCATATACTAAAAAGTCAGTTAGAAATGCTCAGCATGAACCGGAACTCAAAATACTTGCATGTATCCATAATGAAGAAAATGTATATCCAATCATCAACCTTTTCCAAGCCTCTAATCCCACAGAGGCTACACCCCTCTCGGTCTTTATTCTTCACCTTGTGCAGCTTTCAGGTAGTGTAATTCCCACTCTCAAAAAGAATGAGATTGCTAACAAATCATCTCAACACATACACAACGTCTTTGATCAATTTTACCAGCACAACAACGGGTGTGTCAGGCTGCATTTCTTCACAGCACATACCCTATCTGTAAGCATGCCTGATGATGTATGCAGCCTTGCAATGGAGTCCATGTCTAACGTTGTGATTATGCCATTTCATAAGCAATGGTCCAGCAAAGGAAATATGGAGTACTCAAGTACTTCAATTAGGACACTAAACCAAAATGTTCAAAACAAAGCTCCTTGCTCCGTTGGCATCTTCGTAGACCGGAGTCAAATCAGTAAGAAACTATTACTGGTATATGGGAAGTATATTTGTGAAATTGCCATGATCTACTTAGGTGGAGGTGATGACCTCGAGGCATTGTCTTATAGTTTACGTATGGCTCAACATCCAAATGTGAGACTAACAGTGTTCTGGGTTAGGGTTAAAATCCAAGGAAAACAAAGTAAAACAAAGAACCCTTACATTGACTTGATGGAGCATCTACGTTATAGTAGTTACCATGAAGGCAAAGTAACCTTCAAGGAAGAGCCTGTGGAAGATGGGGCTGAAACAACACAAGTTATTCGAAGGATAGAGTCAAACTTTAGTTTGGTCGTAGTTGGTAAGCATCATGTGAAAGACTCTGCATGTACACTAGGATTGACAGAATGGTGTGAACTTCCTGAGCTTGGTCCACTTGGAAACCTCTTAGCCACATCAGATTTTTCATGTTCAGTTTTGGTGGTACAAGAACAACCAAGGTGTTTCTAA 2319 0.3864 MESQISNELISSGMIGNDKLVCQYAIKHTTKGVWYGDNPFHHGTPIILIQIVLMWAAGRITYFLLRPCHQTLIISQILAGVILGPIVLGRHKSTHEMLFPIESQMTLTTFVEFGMIIHFFKMGVQIDPRQILKIEKQAIVIGLTGHMSSLVLSGVVFNIVGSIYPEETTDPSVHVLVISSSVTSFPVVSNFLTEMNIINSEVGRIAVSTSMVSDSCMWILYFVVINGAKAIKHETYKPFTEIIVSISYFASLYFLLRPLVIWISNRNPRGKPMTESHFLTIICILLLVGLTASIAGQPPFVVAFCFGLILPDGPPLGSVLTERLDTVGSTLMVPSYCTIIGLKTSPYAVAETKSITIEIILISMYVGKFLGTILPSLHFQIEFWDSFALAVIMCCKGLMDLCFLDLLLSVKAIGEQPFTLAIFTMVVVTGSASLYVYHMYDPSRKYRSYTKKSVRNAQHEPELKILACIHNEENVYPIINLFQASNPTEATPLSVFILHLVQLSGSVIPTLKKNEIANKSSQHIHNVFDQFYQHNNGCVRLHFFTAHTLSVSMPDDVCSLAMESMSNVVIMPFHKQWSSKGNMEYSSTSIRTLNQNVQNKAPCSVGIFVDRSQISKKLLLVYGKYICEIAMIYLGGGDDLEALSYSLRMAQHPNVRLTVFWVRVKIQGKQSKTKNPYIDLMEHLRYSSYHEGKVTFKEEPVEDGAETTQVIRRIESNFSLVVVGKHHVKDSACTLGLTEWCELPELGPLGNLLATSDFSCSVLVVQEQPRCF* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0778 772 Pfam Sodium/hydrogen exchanger family 61 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu6g0778 772 PANTHER CATION/H + ANTIPORTER 33 769 - -
Pvu6g0778 772 PANTHER CATION/H(+) ANTIPORTER 14 33 769 - -
Pvu6g0778 772 Gene3D - 46 447 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0778 Pvu-Chr6 19377559 19380491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0778 18 768 Antiporter Super Family AT1G06970 34.856 3.46e-159 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0778 - - gmx:100804488 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0778 6 19377559 19380491 Pvu6g0778 6 19377559 19380491 ECH