Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0765 ATGGGAGGTACCTCACCTTGTGCTTCTTGCAAGTTGCTCAGACGCCGTTGCTCCAAGGAATGCATCTTTGCTCCTTACTTTCCTTCTGATGACCCTCGCAAGTTTGCCATAGTGCATAAGGTCTTTGGTGCTAGCAATGTCAGTAAAATGCTCCTGGAGCTTCCAGTTCATCAAAGAGCAGATGCTGTGAGCAGTTTAGTTTATGAGGCAAATGCAAGAGTGAGAGATCCAGTGTATGGATGTGTTGGAGCCATATCATACCTACAGAACCAGGTTTCACAGCTGCAAATGCAGCTTGCAGTGGCTCAAGCAGAGATTCTATGCATCCAGATGCAGCCACAAGAACCTACCTTAACAACACAAGCATACCATGATGACAAATCACTGCTCCTATCAGTACACAATAACTACGAAACTCTTCCTCAGTATCTTCACTTTCCTTCATCCTCTTCCTCCTCTTCAAATGTGCTCCAAGACCCTCATGAGTCTCTTAAGAGAGAGTCTTTTTGGACTTGA 516 0.4516 MGGTSPCASCKLLRRRCSKECIFAPYFPSDDPRKFAIVHKVFGASNVSKMLLELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQPQEPTLTTQAYHDDKSLLLSVHNNYETLPQYLHFPSSSSSSSNVLQDPHESLKRESFWT* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0765 171 Coils Coil 85 105 - -
Pvu6g0765 171 MobiDBLite consensus disorder prediction 151 171 - -
Pvu6g0765 171 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 2 168 - -
Pvu6g0765 171 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Pvu6g0765 171 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Pvu6g0765 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0765 Pvu-Chr6 19261111 19262127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0765 3 131 AS2 family AT2G30130 83.088 2.27e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu6g0765 LOB 3.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0765 - - gmx:100780073 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0765 6 19261111 19262127 Pvu6g0765 6 19261111 19262127 ECH
Pvu6g0765 6 19261111 19262127 Pvu8g2661 8 57021563 57022123 ECH
Pvu6g0765 6 19261111 19262127 Pvu8g2661 8 57021563 57022123 PCT