Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0757 ATGGCGGCAGCGTTGGAGTGCTGGTCGCGCCGCGCCACCAGCGACGAGGACGATGCATTCCTCGCCTCGCATTCCTCACAACCCCGAGACTCTTCTTCTTCGTCTTCTCCCTCTTCCTCTCTCGTCCACAAAAAGCTCCTCAAAATTACGCGCAACGTCTCCGAGGCTCTCTCTTCCCTCAGAAACTCCCTCAATGCTATGAATGATTCTTCCAAACACGACGCGCCTCGCAACCTTGTGTGGACCACCGTCGTGCGCAATCTCAGCCACCTCTATCCCGGGACCCATCTCCCTGAGAAGCTTGTCTGCAACATTCGCAGGCACTATGACTCCCTGCCTCTCAGTTATTCTCAGGCGGGGTTTGATGTGAAAGACGTGTTTCTTCACATGAAGCTGATGGAGCAAGCTTTGGAAGATGAGCAGGCTGCGATTTTGATTCAAGAGGAAGGTGATGGCGAGATTCAACTTCAGGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCTATTTCATGGCCCACAATGTCATGTGCATTGGATGGTTACTCCATTTGCTGCAAGAAGATTCAGATATTTGAGAAGAAAGGATTCACCCTTGGGATTGTGCTTCTTCTTGTACTGTCTAGTGGTGGGCAAGATAAGTTGGTCAGGACCTGGGTTGAAAGTGCTCTCAAGATTTCCATGAAGAGGCCTAAAACCGGTGGCGTGAAGCTTCCCTTTGGGCTTTGTGGGTGTCAAGAAGAGAACACCAAAGGGAGAGGACATGGAGAGATTGTGGAAGATGGTGGTGATGTATGTTGTGGAAATGGGTTTGAGAATTTGAGCCAAAAGATTCAGCTTCAGGTGCCATTACCTAGTTCATCTTTTCTTGTAGTGGTAGATGAATGGCAAACTATTCAATCAGGTGGGGATGGTATTGAAAAATGGTTGTTGAACTCTGATAGTCTTGAGTTTGCAGAACTGATTGGGCCCAATTCGTATAAGGGGATGTATATGGGGAAAAAAGTTGGCATTGAGAAGCTTAGAGGGTGTGAGAAAGGGAGCTCTTATGAGTTTGAGCTCAGGAAAGACCGGCTGGCACTGATGACTTGTGGTCATAGAAGTATTATGCAGTTTTGTGGTGTTTGTGTAGATGAAAACTATGGATTATGTGTATTGACGAAACTTGTGGAAGGTGGATCTGTCCATGACTTAATGTTAAAGAACAAGAAGCTTCCGATCAAGGATGTTGTAAGAATTGCAGTTGATGTGGCTGAAGGGATCAAGTTTATGAATGATCACGGTGTTGCATACAGAGACCTTAATACGCAGAGGATTCTTTTGGATAAGCATGGGAATGCTTGCTTGGCTGATATGGGTATTGTCACTGCCTGCAAGAGTGTTGGAGAGGCAATGGATTATGAAACTGATGGTTATCGATGGCTAGCACCAGAGATAATTGCTGGTGATCCAGAGAGTGTGACAGAGACATGGATGAGTAACGTTTATAGTTTTGGAATGATTATTTGGGAGATGGTAACTGGTGAGGCAGCATATTTGGCATATTCACCCGTGCAAGCAGCAGTTGGAATTGCTGCTTGTGGCCTAAGACCTGAAATCCCCAAGGACTGCCCTCAAACTCTAAAATCTCTCATGATAAAGTGCTGGAACAACACCCCTTCGAAACGTCCTAACTTCTCTGAAATTTTGGCCATTTTGCTACGGACAAACAACTACAGTAGGTAA 1728 0.4612 MAAALECWSRRATSDEDDAFLASHSSQPRDSSSSSSPSSSLVHKKLLKITRNVSEALSSLRNSLNAMNDSSKHDAPRNLVWTTVVRNLSHLYPGTHLPEKLVCNIRRHYDSLPLSYSQAGFDVKDVFLHMKLMEQALEDEQAAILIQEEGDGEIQLQGSLFKLTFACNSPISWPTMSCALDGYSICCKKIQIFEKKGFTLGIVLLLVLSSGGQDKLVRTWVESALKISMKRPKTGGVKLPFGLCGCQEENTKGRGHGEIVEDGGDVCCGNGFENLSQKIQLQVPLPSSSFLVVVDEWQTIQSGGDGIEKWLLNSDSLEFAELIGPNSYKGMYMGKKVGIEKLRGCEKGSSYEFELRKDRLALMTCGHRSIMQFCGVCVDENYGLCVLTKLVEGGSVHDLMLKNKKLPIKDVVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDKHGNACLADMGIVTACKSVGEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMIIWEMVTGEAAYLAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMIKCWNNTPSKRPNFSEILAILLRTNNYSR* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0757 575 PANTHER SERINE-THREONINE PROTEIN KINASE 1 571 - -
Pvu6g0757 575 PRINTS Tyrosine kinase catalytic domain signature 424 442 IPR001245 GO:0004672|GO:0006468
Pvu6g0757 575 PRINTS Tyrosine kinase catalytic domain signature 494 516 IPR001245 GO:0004672|GO:0006468
Pvu6g0757 575 PRINTS Tyrosine kinase catalytic domain signature 538 560 IPR001245 GO:0004672|GO:0006468
Pvu6g0757 575 Gene3D Transferase(Phosphotransferase) domain 1 311 572 - -
Pvu6g0757 575 MobiDBLite consensus disorder prediction 19 39 - -
Pvu6g0757 575 Pfam Protein tyrosine and serine/threonine kinase 352 566 IPR001245 GO:0004672|GO:0006468
Pvu6g0757 575 SUPERFAMILY Protein kinase-like (PK-like) 305 567 IPR011009 -
Pvu6g0757 575 ProSiteProfiles Protein kinase domain profile. 297 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0757 575 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 571 - -
Pvu6g0757 575 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0757 Pvu-Chr6 19189361 19193399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0757 300 567 MAP Kinase Kinase Kinase AT2G17700 31.136 7.28e-49 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Pvu6g0757 PK_Tyr_Ser-Thr 8.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0757 - - gmx:100811417 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0757 6 19189361 19193399 Pvu6g0757 6 19189361 19193399 ECH
Pvu6g0757 6 19189361 19193399 Pvu8g2671 8 57114970 57119445 PCT