Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0750 ATGACTTGGTTGAAGCTATTACGCGTGCTTCTGGCGTTGCTGTCTCTGCTATTCTCCTTCACCATGGAACCTGTTTGGTGTTCCACTCTCAACTCAGAAGGGTTGGCTCTGGAAAAGATGAGGGAGAAAGTGGTGAGAGATCCATTGGGTGGTTTATGGAGTTGGAATAGAGGAGTGGTTCATCACTGTTCCTGGTTTGGAGTACAGTGCTCCCATGGCAATGTTGTATCCTTGAACTTGAAAGATCTATGTCTCCAGGGAACACTAGCACCAGAAATTGGAAAGCTAGTTCACATAAAATCAATTATTTTGCGCAACAACCATTTCCATGGAGAAATCCCTAAGGAAATACTACAGCTAGAGGAGCTAGAAGTTCTTGACTTAGGATATAACAACTTCAGTGGACCATTTCCATCTGAAGAACTTGGCAGCAATCCATCCTTGATTACCTTTTTATTGGACAACAATGACCATCTTGCTTACTTAACTCCGGAAGTGTATAAGCTCGAGAGATTTTCTACTGGTGCTAGTGCTACCTCTAGAGAAGCATGTGTTACCAAATCAAATATCAGGCACATTGGCCAACATGGGGACACAGCACACATAAGGAAACTTCTCCAAGCAGCAAATGGTGCTGAGAGGGGTGATGATGACAAAGACACTCTTTCACCATCACCATCACCTTTGCCCTCTACACTATCACCACTTTCAGAGCCTTTCTCACCATCACCATCAGAGAGTCCCTCAGATTCTCCAACATCTCCAGAACTATCCCCCTCACCATCTCCATCTCTCTCCAGTTTCTTTTTCTCTCTTTCACCCTCACCTTCACCTGTGGCAGCACCAACTCCAGAGGCAAATCCACCTATGCTTGTGTCCGCACCACCACAGTCCAATTGGGTTTCAATGCCTTCTCCTGCTTCATCTGCAAACACTTCAAACACAAACCAGCACAATGTGATTATATGGTCCACAGTCGGGTGCTTCTCCTTGATTTTGGTGTCAGCCATTGTTTTTCTTTTCTTCAGAAGTAACAAGGTTGTCACTGTAAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAGAAAGCATTTTTAACAGGTGTTCCGAGTCTGAAAAGAACAGAACTTGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCACTGCCTGATGGGACTATTTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGTATCCTCTGCAGTGACTTTATCCCAAAACTGGTCCAAAAATCTGGAAACTCAATTCCGAAAGAAGCTAGCGATGTTGTCAAGAATTAACCACAAAAATTTTGTGAATCTAATTGGATATTGTGAAGAGAATAAGCCATTTACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACTCTATTTGAGCATCTACACATTAGAGAAGCAGAAAGACTAGACTGGGGAATGAGAATAAGGATAGCTATGGGAATAGCTTACTGTCTGGAGCACATGCATCAGCTGACACCACCCATTGCCTATAAAAATATACTATCTTCCTCTATATATCTGACTGAAGATTATGCTGCTAAATTATCAGACTTCAGTTTCTGGACTGACATAGTCTCTACAAAGAAGAGTTCTGAAGCCGCACAGCTCGTAGAAACTGCTCCAGAATATATCAAGGCCAATGTTTACAGATTTGGAGTACTATTGTTTGAATTGATTACAGGAAGAATTCCCTTTGCAGTGGAGAATGGCTTATTTGAAGATTGGGCAGCAGAGTATATAAAGGGACAACCCTTGAGAGACGTGGTGGATTCAAACCTGAACTCTTTGCAAGCAAATGAAATCGAGAAATGGGAAGAAGTGATTAACAGCTGTGTAGATCCTGATCCAGAAAAACGACCAACTATGAGGGAGGTTACTTCTAAGTTGAAGGAAATCACCACCATAGGACCTGATGGAGCAACTCCAAAAGCATCTCCTCTTTGGTGGGCAGAAATAGAAATTATGTCCACTGACTTAAGTTCAGACGTGAATCCATAA 2037 0.4266 MTWLKLLRVLLALLSLLFSFTMEPVWCSTLNSEGLALEKMREKVVRDPLGGLWSWNRGVVHHCSWFGVQCSHGNVVSLNLKDLCLQGTLAPEIGKLVHIKSIILRNNHFHGEIPKEILQLEELEVLDLGYNNFSGPFPSEELGSNPSLITFLLDNNDHLAYLTPEVYKLERFSTGASATSREACVTKSNIRHIGQHGDTAHIRKLLQAANGAERGDDDKDTLSPSPSPLPSTLSPLSEPFSPSPSESPSDSPTSPELSPSPSPSLSSFFFSLSPSPSPVAAPTPEANPPMLVSAPPQSNWVSMPSPASSANTSNTNQHNVIIWSTVGCFSLILVSAIVFLFFRSNKVVTVKPWATGLSGQLQKAFLTGVPSLKRTELEVACEYFSNIIGSLPDGTIYKGTLSSGVEIAVVSSAVTLSQNWSKNLETQFRKKLAMLSRINHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAERLDWGMRIRIAMGIAYCLEHMHQLTPPIAYKNILSSSIYLTEDYAAKLSDFSFWTDIVSTKKSSEAAQLVETAPEYIKANVYRFGVLLFELITGRIPFAVENGLFEDWAAEYIKGQPLRDVVDSNLNSLQANEIEKWEEVINSCVDPDPEKRPTMREVTSKLKEITTIGPDGATPKASPLWWAEIEIMSTDLSSDVNP* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0750 678 MobiDBLite consensus disorder prediction 278 297 - -
Pvu6g0750 678 Pfam Protein tyrosine and serine/threonine kinase 387 642 IPR001245 GO:0004672|GO:0006468
Pvu6g0750 678 ProSiteProfiles Protein kinase domain profile. 382 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0750 678 Gene3D Transferase(Phosphotransferase) domain 1 465 650 - -
Pvu6g0750 678 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 671 - -
Pvu6g0750 678 Gene3D Ribonuclease Inhibitor 32 174 IPR032675 -
Pvu6g0750 678 SUPERFAMILY Protein kinase-like (PK-like) 368 642 IPR011009 -
Pvu6g0750 678 MobiDBLite consensus disorder prediction 211 262 - -
Pvu6g0750 678 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Pvu6g0750 678 PANTHER PROTEIN MALE DISCOVERER 2 6 671 - -
Pvu6g0750 678 SUPERFAMILY L domain-like 37 166 - -
Pvu6g0750 678 MobiDBLite consensus disorder prediction 228 259 - -
Pvu6g0750 678 Gene3D Phosphorylase Kinase; domain 1 358 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0750 Pvu-Chr6 19108973 19114697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0750 330 645 Receptor kinase-like Gene Family AT1G69730 32.659 5.03e-38 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pvu6g0750 PK_Tyr_Ser-Thr 1.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0750 - - gmx:100814122 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0750 6 19108973 19114697 Pvu8g2674 8 57143409 57150287 PCT