Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0733 ATGTCCTCTCAACAACAACACTTGATTCAAATGCACTTTCACAACAACCTCAATGCTTCAACCTTTTTTCACTCCTATCACCAATCCTTGTTCTTGTTGCTCCTTTTTTTTGCTGTTCTCATCTTTGTTCCTTCGCTCTTCTTCTGCATCCACTTCTGTCGCCGTTGTTTCTCACGTCATGGAAGAAGCTCCACACCAACCACAGTGCTCTCTCCCCCACCCGATCTTCATTGGGTTGGAATTGAGCTAACAAACAACATCATGCTACCATCTTCAACCACCATGCTTGGTTTTCAGAAGGAAGAAGAATGTTGCATATGTTTGAGTCTTTTCCAAGGTAATGAAAACTTGAAGGTCTTGATTCAATGTAAACATGTCTTTCATTCTCACTGCTTAAACTTGTGGCTCACTGCACACCCTTCTTGTCCTCTCTGCAGGGCCTCACTCCATGTCAGACAAAATCTCAACAAATAA 474 0.4241 MSSQQQHLIQMHFHNNLNASTFFHSYHQSLFLLLLFFAVLIFVPSLFFCIHFCRRCFSRHGRSSTPTTVLSPPPDLHWVGIELTNNIMLPSSTTMLGFQKEEECCICLSLFQGNENLKVLIQCKHVFHSHCLNLWLTAHPSCPLCRASLHVRQNLNK* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0733 157 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Pvu6g0733 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 155 IPR013083 -
Pvu6g0733 157 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 151 - -
Pvu6g0733 157 SUPERFAMILY RING/U-box 99 152 - -
Pvu6g0733 157 SMART ring_2 104 145 IPR001841 -
Pvu6g0733 157 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 151 IPR044675 -
Pvu6g0733 157 Pfam Ring finger domain 103 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0733 Pvu-Chr6 18945216 18945869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0733 32 149 Rapid Response to Elicitors AT3G05200 34.400 1.32e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0733 - - gmx:102667569 177.948