Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0732 ATGTTACAGAGTGTATCTAAAATACATATATATCCACCCACCCACAGAAAACAGACACCCTTCAAGTCCAAACCTTTGAGCCAAAACCAAACACCCTTTTGGCCACTCTTCACAATGCCAACCCAACCTGACTCACCCAACACGTTGACCCAAATGTTTCAGAACATCTTCTCAGACAACAGTAACATTATGCTTGCAGCCATCATTTCCCTTCTCCTTGTCATCCTTTTTGTCCTCCTTCTCCACCTCTATGCCAAATGGTTCCTTGCTCAGGCACAGGCTCAGGCACACGCCCGCCGTCGACGCCGCCGCCGACGAACGACGGTGACTGTCTCCGACGTCCTTGGCCCGGCAAGGTTCCACCACTTCCACGGCTTCAACATAGAAGACTCCTCACCCCTCTCAACCAAAGGCCTTGATTCTTCCACCATCAGAGCAATTCCTCTCTTCATCTATGAGCATAACAGGGCCAATGAAGATGAAGAACTTGATTGTGTGATTTGTTTGAGTGCCTTTGAGGGTGGTGAAGTGGGAAGGTGTTTGCCAAAGTGTGGCCATGGTTTTCATGTGGAGTGCATTGACATGTGGTTGAGTTCACACTCCAATTGTCCTATTTGTAGAGCCCCCATTGTAGTAAATGTTGTTGAGAGTGATTCTTCTCAGGTTGTGTCTTCAAGAGATCATGGTGATGAATATGGTGGTTCTGATTTTGAGATTGTGATTGATGCTGGTTCTGATGAGAGTAGAGAGAGTGAGACCGGGAGTGGTAATGGTAATGGTAATGGCAACGTAGGAGCAAGAACAAGTGTTTCTGTGTCAGAAACTTCTTTCTCATTTTTTGGGTGCTCTTTGGAGAGAATGCTTGGCAAGGTTTTCCCATCCACTAATTAA 891 0.4646 MLQSVSKIHIYPPTHRKQTPFKSKPLSQNQTPFWPLFTMPTQPDSPNTLTQMFQNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQAHARRRRRRRRTTVTVSDVLGPARFHHFHGFNIEDSSPLSTKGLDSSTIRAIPLFIYEHNRANEDEELDCVICLSAFEGGEVGRCLPKCGHGFHVECIDMWLSSHSNCPICRAPIVVNVVESDSSQVVSSRDHGDEYGGSDFEIVIDAGSDESRESETGSGNGNGNGNVGARTSVSVSETSFSFFGCSLERMLGKVFPSTN* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0732 296 PANTHER - 39 295 - -
Pvu6g0732 296 Pfam Ring finger domain 164 207 IPR001841 -
Pvu6g0732 296 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 39 295 IPR044675 -
Pvu6g0732 296 MobiDBLite consensus disorder prediction 246 267 - -
Pvu6g0732 296 CDD RING-H2_EL5_like 164 207 - -
Pvu6g0732 296 SUPERFAMILY RING/U-box 145 213 - -
Pvu6g0732 296 ProSiteProfiles Zinc finger RING-type profile. 165 207 IPR001841 -
Pvu6g0732 296 MobiDBLite consensus disorder prediction 250 267 - -
Pvu6g0732 296 SMART ring_2 165 206 IPR001841 -
Pvu6g0732 296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 123 212 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0732 Pvu-Chr6 18939698 18940811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0732 57 276 Rapid Response to Elicitors AT3G16720 33.182 5.95e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0732 - - pvu:PHAVU_006G070000g 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0732 6 18939698 18940811 Pvu6g0732 6 18939698 18940811 ECH
Pvu6g0732 6 18939698 18940811 Pvu8g2680 8 57187280 57189194 PCT