Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0727 ATGTCTTGTTCCGTGGCAGTTCCCACTTCCCCCGTGTTCTCTCTCTTCAACAACACCACCAACAACAATGACTCTTCTTCCATGCCAGAATCTCTCATGCTTTCTCTTCCCATTCCCTCTACGACACCCTCTTGCTCCTCTCCACCTTCCTCTCCCATGTTGAAGCGAAGAAGACCTGCAAAGCTCGACATTCCCGTCGCTTCTCTTGCTTATACGCTCTCGACGGCGCCCGCGCCGTCTTCGGCGAGGGACGCGGTCGTCGAGCTCGACGAAAGCGGCTTTTCTGTGTTCTGCAAACGAGGAAGGAGGCACCACATGGAGGACCGTTACTCCGCTGCCGTTGATCTTCACGGTGAACCCAAACAGGCTTTCTTCGGCATATTTGATGGGCATGGGGGCACAAAGGCTTCGGAATTCGCTGCACATAACTTGGAGAAGAATGTGTTGGATGAGGTGGTTAGGAGAGATGAAAGTGACATTGAGGAGGCAGTGAAGCATGGTTACCTCAACACGGATTCTGAATTCTTGAAGGAGGATCTTCATGGTGGCTCTTGCTGTGTGACAGCATTGATAAGGAATGGTAACCTCGTTGTGTCTAATGTTGGGGATTGTCGTGCTGTGATTAGCAGAGAGGGGGTGGCAGAAGCCCTCACATCTGATCACAGGCCTTCAAGGGAAGATGAAAGGGACAGAATTCAAACTCAGGGTGGCTATGTTGATGTGTGCCGTGGTGTGTGGAGGATTCAAGGGTCATTGGCTGTTTCTAGGGGAATTGGAGATAGGAACCTGAAACAATGGGTGATAGCAGAACCTGAGACCAAAGTTCTTAAAATTGAATCTCTGCATGACTTGTTGATCTTAGCTTCAGATGGCTTATGGGAAAAGGTTAGCAATCAGGAAGCAGTGGATATTGCTCATCCTTTTTGTGTAGGGAACAATAGTCAACAACCTTTGCTGGCTTGTAAAAAGCTCGTGGATTTATCTGTGTCGAGAGGCTCTGTGGATGATATAAGTGTAATGATTATCAAGTTGCAAAACTATGTTTGA 1047 0.4842 MSCSVAVPTSPVFSLFNNTTNNNDSSSMPESLMLSLPIPSTTPSCSSPPSSPMLKRRRPAKLDIPVASLAYTLSTAPAPSSARDAVVELDESGFSVFCKRGRRHHMEDRYSAAVDLHGEPKQAFFGIFDGHGGTKASEFAAHNLEKNVLDEVVRRDESDIEEAVKHGYLNTDSEFLKEDLHGGSCCVTALIRNGNLVVSNVGDCRAVISREGVAEALTSDHRPSREDERDRIQTQGGYVDVCRGVWRIQGSLAVSRGIGDRNLKQWVIAEPETKVLKIESLHDLLILASDGLWEKVSNQEAVDIAHPFCVGNNSQQPLLACKKLVDLSVSRGSVDDISVMIIKLQNYV* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0727 348 Pfam Protein phosphatase 2C 94 337 IPR001932 -
Pvu6g0727 348 PANTHER PROTEIN PHOSPHATASE 2C 3 347 IPR015655 GO:0004722|GO:0006470
Pvu6g0727 348 SMART PP2C_SIG_2 104 344 IPR001932 -
Pvu6g0727 348 CDD PP2Cc 93 344 IPR001932 -
Pvu6g0727 348 ProSiteProfiles PPM-type phosphatase domain profile. 93 344 IPR001932 -
Pvu6g0727 348 SMART PP2C_4 80 342 IPR001932 -
Pvu6g0727 348 SUPERFAMILY PP2C-like 94 346 IPR036457 -
Pvu6g0727 348 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Pvu6g0727 348 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 3 347 - -
Pvu6g0727 348 Gene3D - 93 347 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0727 Pvu-Chr6 18882683 18885120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0727 1 348 PP2C-type Phosphatase Gene Family AT2G30020 57.000 2.12e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0727 K17506 - gmx:100779913 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0727 6 18882683 18885120 Pvu6g0727 6 18882683 18885120 ECH
Pvu6g0727 6 18882683 18885120 Pvu8g2685 8 57247519 57249801 ECH
Pvu6g0727 6 18882683 18885120 Pvu8g2685 8 57247519 57249801 PCT