Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0716 ATGACACCACCCTTCACTCTCTCCCTCTCCCTCTTCGCCGTTTTCTCTATAACCGCCGTGCACGGCCTCGGCTCCGCCGCAACCATCGCCGTCACGTACGGCACCGCAACCGTGTGCGGTGTCGTCGCCGGGGAGCTCCACCACCGCATACAGTGCTCCCGGGACGGCAGGCGCGTCCCTCTCACGCTCCCCAACGCCTCCTTTGAGACCATATCCGGCGGCAGGAGCTTCTTCTGCGGTCTGCGCTCCGGCGGGTGGAGCCTCCACTGCTGGGATACCGCCGCCGCAGACGGTGCGTTCTACCCCAAGAGGGTCTTCCACAGCGACGTGGTGCAGTTGGCCGACGTGTCTGTTGGTGATTCCCAGGTGTGCGCGAGGGAGGTGCAATCCGGTGTGGTGAGGTGCTGGAGAGGAAACGGGAGGATGGAGCTTGTTTCTCCCTCGGAGAGCTTAAGGTTTCGAAGCGTCACATGTGGTCGTGGTTTTTCATGTGGGATATTGAGAGAGAGCGGGAGGGTTGTCTGCTGGGGTGGTGGTGATGATGAGGGTGCATATATCATTGGTCAGATTCAAAGAAAGTTTGAGAATATTTCTATGACGAGTTTGGTTGCTGGGGTGTCTCATGCATGTGGTTTGACTCTTCATGGGGCTTTGATTTGTGGAGGGAACAATAGTTCAGGTCAACTTGGAAACAGTGTTTTTTTAGGTTCTTTAGATTTTTCGAGTCTTGCTTTGGGAGACGGTTTCACGTGTGGCATTAGGCGGAGGAATGGGGTTGTTGTGTGTTGGGGGGGTGGTTTTGATAGTGATGTGGTGAAGGGTGTTTCTTTTGAGTCTCTTGTTGCTGGTTTGGATTATATTTGTGGGTTGATGACTGGGAATTTGTCTGTGGTTTGTTGGGGTGGTAAGGGTGGGTTTGATGTGCCTAATGAGATTCCATTGGGAGTGATTCTCCCGGCTCCTTGTGTTGAGGATGGATGTGGTAGCTCTTGTGGTACATATCCTGATTCTGATGCTCTTTGTCACGGGTCTGGGAAAATTTGTTATGCTTGCCACACTGAGGTTCCACTGGCTGTGCCATTGTTTCCACCAGAATCATCACAAGTGTCTTCTTCACATGAAGGAAGAAAATTGAAGGAGTTTGTGGTGTTTATGGTTGTTGGATCAGTTGGGGCTTTTGCCGGTCTTTGCACTATTGTTTATTTCCTCTGGTTTGGTGCAAAGAGGGTTTTGGTGAGGAGAGAAGTAAGTAATAGTTCTGTGAAGCCTACAAGCTCAGAGAGTGATGCCTATGTGGATATAATCCCAATGCCTAATGTTGGTTCAAATGGGACAACCTTTAGAACTTTTTCTAGTAAAAGCCATGGGTCAAGAAGATTGAGGAGGCATAGGAGTGGTTCATCATCCAAGCATGTGGACAGGACTGAGAGTTTCTCATTGCGTGAACTGGCAACAGCCACTGAGAATTTCTCATTGCATAATAAGATAGGTGCTGGTAGCTTCGGCAGTGTTTACAAAGGTATGCTTGGAGATGGTCGTGAAGTGGCTATTAAAAGAGGAGATACTAGTACCATGAAGAAGAAATTTCAGGAGAAAGAAATTGCTTTTGATTCTGAACTGGCCATGCTATCCCGGCTTCACCACAAGCATTTGGTGAGGCTAATTGGGTTCTGCGAGGAGAATGATGAGAGGCTTTTGGTCTATGAGTACATGAGCAATGGCTCACTTTATGACCATTTGCATGACAAAAACAATACTGAGAAGAGTAGCAGCATTTTAAATTCTTGGAAGATGAGGATCAAGGTTGCATTGGGCGCTGCTAGGGGAATTGAGTACATTCACAACTATGCTGTGCCACCCATTATTCACAGGGATATCAAGTCATCAAATATACTTTTGGACTCAAACTGGAATGCCAGAGTATCAGACTTTGGATTGTCACTAATTTGGCCCGAGACTGAGCAAGAATTGATGTCCACCAAGGCAGTTGGAACTGTTGGCTACATAGACCCTGAGTACTATGTGTTGAATGTGCTAACCACAAAGAGTGATGTGTATGGTTTAGGAGTGGTGATGCTGGAGCTTCTGACAGGAAAGAGAGCTGTGTTCAAAACTGAAGATGGGTCAAGCCCTATAGGGGTAGTGGAACACACAGGTCCAAAGATAGCATCAGGAGAGCTTTGGAGTGTGTTGGATTACAGAGTTGGACAGCCAGAAGTAAATGAGGTTGAGTCCCTTGAGATCATGGCTTACACTGCTATGCACTGTGTGAACATGGAGGGAAAAGAGAGGCCAGAAATGACTGACATAGTTGCTAACTTGGAGAGGGCATTGGCTTTCATTGAAGGCAGCCCTACTAGCATCTCCCTGGCATCCTTCTCTGCCCCTCTTGAATGA 2397 0.4839 MTPPFTLSLSLFAVFSITAVHGLGSAATIAVTYGTATVCGVVAGELHHRIQCSRDGRRVPLTLPNASFETISGGRSFFCGLRSGGWSLHCWDTAAADGAFYPKRVFHSDVVQLADVSVGDSQVCAREVQSGVVRCWRGNGRMELVSPSESLRFRSVTCGRGFSCGILRESGRVVCWGGGDDEGAYIIGQIQRKFENISMTSLVAGVSHACGLTLHGALICGGNNSSGQLGNSVFLGSLDFSSLALGDGFTCGIRRRNGVVVCWGGGFDSDVVKGVSFESLVAGLDYICGLMTGNLSVVCWGGKGGFDVPNEIPLGVILPAPCVEDGCGSSCGTYPDSDALCHGSGKICYACHTEVPLAVPLFPPESSQVSSSHEGRKLKEFVVFMVVGSVGAFAGLCTIVYFLWFGAKRVLVRREVSNSSVKPTSSESDAYVDIIPMPNVGSNGTTFRTFSSKSHGSRRLRRHRSGSSSKHVDRTESFSLRELATATENFSLHNKIGAGSFGSVYKGMLGDGREVAIKRGDTSTMKKKFQEKEIAFDSELAMLSRLHHKHLVRLIGFCEENDERLLVYEYMSNGSLYDHLHDKNNTEKSSSILNSWKMRIKVALGAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETEQELMSTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFKTEDGSSPIGVVEHTGPKIASGELWSVLDYRVGQPEVNEVESLEIMAYTAMHCVNMEGKERPEMTDIVANLERALAFIEGSPTSISLASFSAPLE* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0716 798 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Pvu6g0716 798 SUPERFAMILY RCC1/BLIP-II 24 266 IPR009091 -
Pvu6g0716 798 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 6 791 IPR044815 GO:0004674
Pvu6g0716 798 Gene3D - 64 354 IPR009091 -
Pvu6g0716 798 ProSiteProfiles Protein kinase domain profile. 490 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0716 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Pvu6g0716 798 Pfam Protein kinase domain 491 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0716 798 MobiDBLite consensus disorder prediction 450 473 - -
Pvu6g0716 798 SMART serkin_6 490 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0716 798 SUPERFAMILY Protein kinase-like (PK-like) 467 774 IPR011009 -
Pvu6g0716 798 MobiDBLite consensus disorder prediction 454 468 - -
Pvu6g0716 798 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 6 791 - -
Pvu6g0716 798 CDD STKc_IRAK 496 776 - -
Pvu6g0716 798 Gene3D Transferase(Phosphotransferase) domain 1 571 782 - -
Pvu6g0716 798 Gene3D Phosphorylase Kinase; domain 1 451 570 - -
Pvu6g0716 798 Pfam Regulator of chromosome condensation (RCC1) repeat 154 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0716 Pvu-Chr6 18689709 18692381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0716 6 789 Receptor kinase-like Gene Family AT3G55950 50.675 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu6g0716 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0716 - - gmx:100776682 1317.37