Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0711 ATGTCACACCACACTATGGAGGAGGACTTAAACATCTTGGAGATGAACACTGAGCCTTGTAACAACAGCAATGCTACATGTGCAAAGACAGCACCACCACAGGCACAGAACAACCTCACATCTTCAACTGTAACAAAGAAATGTCCATTTCTGGTCACCAAAGTTCACTGCCAAATGCTTAGGAGTTTCACAGCCAATTTGAAAGAGGTTGTTTTTGGCACTAAGCTTGCAGTGCTTTTTCCTGCTGTCCCTTTGGCTGTTGTTGCAGATTTTTATAGCCTTGGAAGGCCTTGGATTTTTGCTTTGAGCCTGCTTGGACTCACCCCGCTAGCTGAACGTGTCAGCTTCCTTACTGAGCAAATTGCGTATTACACTGGCCCCACAGTTGGAGGGCTTCTAAATGCAACCTGTGGTAATGCAACTGAGATGATCATATCTTTGCTAGCACTTCACCAAAACAAAGTAAATGTTGTGAAGTTCTCCCTGCTGGGTTCCATTCTCTCAAACCTTCTATTAGTTCTTGGAAGTTCACTCCTTTGTGGAGGCTTAGCCAACCTTAGGAAGGAGCAAAGATATGACAGAAAACAAACAGATGTAAACTCACTGGTTTTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTAATGTTCAGATATGCCATAGCAGAAGAATATCCTTCAATAGCCACTAGCACTCTACAATTGTCCAGAGCAAGCAGCATTGTTATGCTTCTTGCATATGCCGGATACATCTTCTTTCAATTAAAAACACATCGACAATTTTTCGATGGACAAGAGGAAGATGAAAACGAAGAAGAGAAGGCTGTGATAGGATTTTGGAGTGCATTTACTTGGTTGGTTGGTATGACACTTATCATATCTCTGCTTTCTGAATATGTTGTGGCAACCATTGAGGCTGCTTCAGATTCCTGGGGCATTTCTGTTAGCTTCATTAGCATAATTTTGTTACCAATTGTGGGAAACGCTGCAGAGCATGCTGGCTCAATCATTTTTGCTTTTAAGAACAAGTTGGACATATCATTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTAGTTGTTGCATGGATAATGGGTATAGAAATGGACTTGGATTTCAATCTCCTTGAAACCGGGTGTCTTGCTTTTACAATTATTGTTACAGCATTCACTTTGCAGGATGGAACTTCACACTACATGAAAGGAGTGGTTCTTTTCCTGTGTTACATTATCATTGCTGCATGCTTTTTTGTTCACAAAACTCCACTAATTAATGAAGCATAG 1308 0.4144 MSHHTMEEDLNILEMNTEPCNNSNATCAKTAPPQAQNNLTSSTVTKKCPFLVTKVHCQMLRSFTANLKEVVFGTKLAVLFPAVPLAVVADFYSLGRPWIFALSLLGLTPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIISLLALHQNKVNVVKFSLLGSILSNLLLVLGSSLLCGGLANLRKEQRYDRKQTDVNSLVLLLGLLCHLLPLMFRYAIAEEYPSIATSTLQLSRASSIVMLLAYAGYIFFQLKTHRQFFDGQEEDENEEEKAVIGFWSAFTWLVGMTLIISLLSEYVVATIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIEMDLDFNLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLFLCYIIIAACFFVHKTPLINEA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0711 435 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 23 433 IPR004713 GO:0006812|GO:0008324|GO:0016021
Pvu6g0711 435 PANTHER VACUOLAR CATION/PROTON EXCHANGER 23 433 - -
Pvu6g0711 435 TIGRFAM cax: calcium/proton exchanger 81 425 IPR004798 GO:0006816|GO:0015369
Pvu6g0711 435 TIGRFAM caca2: calcium/proton exchanger 62 425 - -
Pvu6g0711 435 Pfam Sodium/calcium exchanger protein 98 255 IPR004837 GO:0016021|GO:0055085
Pvu6g0711 435 Pfam Sodium/calcium exchanger protein 282 423 IPR004837 GO:0016021|GO:0055085
Pvu6g0711 435 Gene3D - 127 276 IPR044880 -
Pvu6g0711 435 Gene3D - 277 426 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0711 Pvu-Chr6 18637654 18640952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0711 16 430 Antiporters AT2G38170 65.012 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0711 K07300 - gmx:100778821 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0711 6 18637654 18640952 Pvu6g0711 6 18637654 18640952 ECH
Pvu6g0711 6 18637654 18640952 Pvu8g2702 8 57412007 57415762 PCT