Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0699 ATGGCATTAGAACTTGTTGGTGGTGCTCTTCTTTCTACTTTCCTACAGGTGGCATTCCAGAAGCTAGCTTCTCCTCAAATTCTCGATTTCTTTCATGCAAGAGAGCTTGATAAGAAGCTGCTCAACAAGTTGGAAACCAAGCTGCACTCCATCCATTCTCTGGCTGATGATGCAGAGCGAAAGCAGTTCATGGATCCTCATGTCAGAAACTGGCTGCTTAAGGTCAAAGATATTGTCCTTGATGCAGAGGATCTCTTGGATGATATACAAAAGCTCTCCAAAAGACAAGTAGATGCTGAATCTGAATCTCAAACCTGTTCAGGCTGTACTTGCAAGGTACTCAATTTCTTCAAATCTTCTCCTATTAGTTCCCTTAACAAGGAAATTGAGTGTAGGATGAAACAAATCCTTGATGACTTAGAATTTCTCTCAAGCCAAAGGGGTGATCTAGGATTGAAAACCGCTAGCAGTGTTGGATCTGGGTTGAGTAATGAACTGCCACAGAAATCACAAACAACATCGTTGGTTGTTGGATCTGATATCTATGGCAGAGATGATGATAAAAGACTGATCATTGATTGGTTGACTTCTGACATCAACAATGGTAACCAACCATCAATACTTTCTGTTGTGGGAATGGGTGGAGTGGGTAAGACCACTCTTGCTCAACATGTATTCAATGACCCGAGGATATCAAGAGCAATTTTTGAAGCTGTTACTAAATCAAGTGATGATAGTAGAGATTTGGAAATGGTTCATAGAAGATTGGGAGAAGAATTGACGGGGAAGAAATTTTTTCTTGTTTTGGATGACGTTTGGAACGAAAACCAAACTAAGTGGGAAGAAGTGCAGAAGCCCCTTGACCTTGGAGCCCAAGGAAGTAGGATTCTTGTGACTACACGTAATAAGGAAGTTGCTTCTACCATGCGGTCAAAAGAACACTCCCTAAAGCAATTACAAGAAGATCATTGTTGGAAGTTGTTTGCTAAACATGCATTTGGATATGTTGATACTCAACCAAATCCAAAGTGCAGGGAGATTGGCATGAAGATTGTTAAAAAATGTAAAGGACTACCACTCGCCTTGAAAACAATGGGAAGTCTGTTATACAACAAATCATCTGTTTCGGAATGGGAAATTGTGTTCCAAAGTGAAATATGGGAATTTTCAAAAGAGCGTTGTAATATTATGCCTGCTTTAGCATTGAGCTATATCCACCTTCCTTCCCATCTTAAGGATTATGAGTTTAAAAAGGAGTGTTTAATTCAGTTGTGGATGACTGAAAATTTTCCACACTGTCGTCAACATAGTAGGACTGCAGAAGAAGTTTGTCAACAATACTTCAATGATCTACTATCAAGGTCCTTCTTTCAACAATCAGGTGAAAACGAAGAAGTTTTTTTCATGCATGACCTTTTAAATGATTTGGCAAAATATGTTGGTGGGGACATGTATTTCAGGTTGGAAGTTGGCCAAGAAAAACATATACAAAAAGTAACTCGTTATTTTTCAGTTCAACTTGGTCTATATCAATACTTTGATGGGTTTGGAACTTCTTGTGATACAAAAAGGTTACGCACATTTATTGCAATGAGAGTGAATGATTTAGGCTATGCCTGGAAGTGTTATATGTCAATACAAGAATTGTTCTCCAAGTTTAAGCTCATACGTATCTTATCTCTGTCTCAATATTTTGACCTTCAAGAGTTACCTGACTCTGTTGGCAATCTTGAGTATCTTCGTTCCCTAGACCTCTCCCATTTGGAGGAGTTGCCTTTAAATTTGCATTTACTCACCAATTTGTGTCGCCTTGAATTTAGGATGACTAAAGTGAGAAAGGTGCCACCTTATTTGGAAAAACTGAAGAATCTTAAATTAGTAATGAATTCCTTTAATGTTGGCCATGATAGGGAGTTGGGTATTCAACGGCTAAGAGAGTTCAACCTTGAGGGAAGTTTATCAATTGGGGAGCTCCAGAATATTGAGAACCCCCTTGATGCATTAGAAGCAGATTTGAAGAATAAAACACACCTTTGGTGCGATCGGAACTCTGTTGATTCAAAAAAACAAGAGTACGTAATTGAGAATCTCCAACCTTCCAAAAATATAAAGGAGTTGGCAATCTTTGACTATGGTGGCAAACAATTTCCAAATTGGTTACTAGAAAATTCATTATGGAATTTGGTGTCCTTAAAGTTGAATGAATGTGAATCTTGCCAACGTTTACCTCCACTTGGTCTTTTGCCATGTCTAAAGATTCTTGACATTTCAGGGTTTCATGAGATAGTGAGTATCGATGCTGGTTTTCATGGGAATAACTCTTCTTCATTTAAATCCCTTGAAACATTGGATATTTCCGATATGAGTCATTGGGAAAAGTGGGAATGCCAAGTTGTGACAGGTTCTTTCCCACATCTACAAAGGCTTTCCATAAAATTTTGTCCCAAGTTGAAAGGACAATTGCCAAAGCAAGTTGTTCCTTTGAAAATACTACAAATTGAAGATTGTCAACAACTTGAGGCTTCCGCTCCCAGGGCTCTAGATTTGGAACTAAGTGAGTGTGGAAAGCTGCACTTGGACTGGGCTACAATGAAAATTCTCAGAATGGAAGAAGTATCATTGCTGGAAATTGCTGGGTCCGACAATCTTGAACACTTAGAGGTTGATTCAGTCCTACTATCAATAAGTGATAACTGTGTCTCTCTATGCACCTTTCCACTGGATTTCTTCCAAACACTGAAGACCCTTAATCTCTATGGGTTTCATAATTTACAGATGATTTCACAAGGTCTCATTCATAATCATCTGGAGTGTTTGGAAATTTTTAGCTGTCATAAATTAGAATCATTGTGTGGAAACATGCGTATGCTGCTTCCATCTCTGAGAATGTTCTTGATAAAAGACTGTCCAAGACTTGAGTTGTTCCCTGACGGAGGTTTCCCATCAAATCTAGAAGACCTGACAATAGAAGATTGTCCAAGACTTGAGCTTGTTGACTCAATGAAAAGAGCTTTCGGAGACAATTCTTCTTTGGAAAGCTTGTCGATTGCAAAACTAGATGTAGAATGTTTTCCTCACAAAGGTTTGCTTCCACTCTCTCTTACTTGTCTAACCATCGGTCGTTGTCTAAATCTAGAAAAACTGGACTACAAAGGTCTCCGTCAACTCTCATCCCTTCAAGCACTGAGTCTTGAGAACTGCCCCAACCTCCAATGCTTACCGGAGGAGGGTCTTCCCGAATCAATTTCATGTCTTGAAATAAAGCAGTGTCCTTTGCTGAAACAGCGTTGCCAGAAAGAACTAGAACAAGGAGGTGAAGACTTGGAAAAGATTTTAAACATTCAAAGACTACTTATTATGTAG 3363 0.3895 MALELVGGALLSTFLQVAFQKLASPQILDFFHARELDKKLLNKLETKLHSIHSLADDAERKQFMDPHVRNWLLKVKDIVLDAEDLLDDIQKLSKRQVDAESESQTCSGCTCKVLNFFKSSPISSLNKEIECRMKQILDDLEFLSSQRGDLGLKTASSVGSGLSNELPQKSQTTSLVVGSDIYGRDDDKRLIIDWLTSDINNGNQPSILSVVGMGGVGKTTLAQHVFNDPRISRAIFEAVTKSSDDSRDLEMVHRRLGEELTGKKFFLVLDDVWNENQTKWEEVQKPLDLGAQGSRILVTTRNKEVASTMRSKEHSLKQLQEDHCWKLFAKHAFGYVDTQPNPKCREIGMKIVKKCKGLPLALKTMGSLLYNKSSVSEWEIVFQSEIWEFSKERCNIMPALALSYIHLPSHLKDYEFKKECLIQLWMTENFPHCRQHSRTAEEVCQQYFNDLLSRSFFQQSGENEEVFFMHDLLNDLAKYVGGDMYFRLEVGQEKHIQKVTRYFSVQLGLYQYFDGFGTSCDTKRLRTFIAMRVNDLGYAWKCYMSIQELFSKFKLIRILSLSQYFDLQELPDSVGNLEYLRSLDLSHLEELPLNLHLLTNLCRLEFRMTKVRKVPPYLEKLKNLKLVMNSFNVGHDRELGIQRLREFNLEGSLSIGELQNIENPLDALEADLKNKTHLWCDRNSVDSKKQEYVIENLQPSKNIKELAIFDYGGKQFPNWLLENSLWNLVSLKLNECESCQRLPPLGLLPCLKILDISGFHEIVSIDAGFHGNNSSSFKSLETLDISDMSHWEKWECQVVTGSFPHLQRLSIKFCPKLKGQLPKQVVPLKILQIEDCQQLEASAPRALDLELSECGKLHLDWATMKILRMEEVSLLEIAGSDNLEHLEVDSVLLSISDNCVSLCTFPLDFFQTLKTLNLYGFHNLQMISQGLIHNHLECLEIFSCHKLESLCGNMRMLLPSLRMFLIKDCPRLELFPDGGFPSNLEDLTIEDCPRLELVDSMKRAFGDNSSLESLSIAKLDVECFPHKGLLPLSLTCLTIGRCLNLEKLDYKGLRQLSSLQALSLENCPNLQCLPEEGLPESISCLEIKQCPLLKQRCQKELEQGGEDLEKILNIQRLLIM* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0699 1120 PANTHER OS05G0414200 PROTEIN 14 953 - -
Pvu6g0699 1120 Pfam Rx N-terminal domain 11 98 IPR041118 -
Pvu6g0699 1120 Gene3D Ribonuclease Inhibitor 534 642 IPR032675 -
Pvu6g0699 1120 Coils Coil 41 61 - -
Pvu6g0699 1120 SUPERFAMILY L domain-like 469 836 - -
Pvu6g0699 1120 Pfam NB-ARC domain 231 403 IPR002182 GO:0043531
Pvu6g0699 1120 Coils Coil 126 146 - -
Pvu6g0699 1120 Gene3D - 403 479 IPR036388 -
Pvu6g0699 1120 Coils Coil 75 102 - -
Pvu6g0699 1120 Gene3D Ribonuclease Inhibitor 847 1111 IPR032675 -
Pvu6g0699 1120 Coils Coil 302 322 - -
Pvu6g0699 1120 PANTHER DISEASE RESISTANCE PROTEIN RP 14 953 IPR044974 GO:0006952
Pvu6g0699 1120 PRINTS Disease resistance protein signature 207 222 - -
Pvu6g0699 1120 PRINTS Disease resistance protein signature 355 369 - -
Pvu6g0699 1120 PRINTS Disease resistance protein signature 575 591 - -
Pvu6g0699 1120 SUPERFAMILY L domain-like 881 1095 - -
Pvu6g0699 1120 Gene3D - 319 402 IPR042197 -
Pvu6g0699 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 413 IPR027417 -
Pvu6g0699 1120 Gene3D - 175 318 IPR027417 -
Pvu6g0699 1120 Gene3D Ribonuclease Inhibitor 643 829 IPR032675 -
Pvu6g0699 1120 Gene3D - 17 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0699 Pvu-Chr6 18542599 18546221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0699 208 382 WRKY Transcription Factor Family AT5G45050 26.531 2.50e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0699 - - pvu:PHAVU_011G201100g 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0699 6 18542599 18546221 Pvu6g0699 6 18542599 18546221 ECH