Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0696 ATGAAGAAAACACCAGGCCACAGTTTGCATCAATCTGATAAAAGAAAAAGGAATGTTGGTGTCCAAGAGAGAGGGGCAGGAAATGGCACACAGAGGCACAGTGTTGAGAACCATACTTTTCTGACATATTTCAAGAATTTTTTTTCATCTTTTCTATCTGGGAAAAGAAAATCTGCCCCAGAAGCCCCCCAAAGTGATGACAGAAAGGGTACACACAAAGTTGGAGGGGTATCGTCTTCCACAGATGTATCCTCTGATAGTTCTAGGAGTTCATCAAAAGGGGTATTATCTCAATCCTCTCCATCATCTGGCACTTCAAGTAGTCACCTTGGAATTGGGAACTTCACCTTTGAGGAAATTTACAAGGCAACAGCAAAGTTCTCTCCAGACAATAAGATTGGGGAAGGCGCGTTTGGTACAGTGTATAAGGGAAGGCTTTACGATGGATCCCTCGTGGCTGTGAAGCGTGCCAATAAGGATTTACAGAACAAGAACGTAGCTGAGTTCAAGAATGAAATAAAAACCTTGTCAAATATTGAGCACAGGAACCTTGTAAGGTGGCGTGGGTATTTGGAGCATGGAGATGAAAAGATTATTGTTCTTGAATATGTTAGTAATGGAACTCTTCGAGACCATTTAGATGGTATTCGGGGAAATGGACTAGAAATTGGTGAGCGTCTGGACATAGCCATTGATGTAGCTCATGGAATTACTTACCTTCACATGTACACAGATCATCCAATTATTCATAGGGACATCAAAGCATCAAATATCTTAATCACTGATAAACTAAGGGCCAAAGTAGCAGACTTTGGTTTTGCTCGGAAGGGTGCAGAAGACCCTGCTGCAACCCATATTTCAACTCAAATCAAAGGAACAGCTGGCTACTTAGATCCTGACTACATGCGAACGCAACATCTATCTGAAAAGAGTGATGTCTATTCTTTTGGTGTGTTGCTTGTTGAAATGATGACAGGACGATATCCAGTTGAACCAAAGAAACCTCTTAGTGAGAGAGTTACAATTAAATGGGCAATGCAGATGCTGAAAGAAGGAGAAATTGTGATTGCCATGGATCAAAGACTAAAGAGAAATCCAGCCTCAAACAAAGCAGTACAAAAGGTTCTCAAGCTAGCTTTCCAATGCCTTGCACCAGTGAGGCGATCACGGCCATCTATGCAGAGTTGTGTAGAGGTTCTGTGGGAAATCCGCAAAGATTTTACAGATAGAGCATCTTCTCGTACTCATAATGGTTCTCACCATTCTGCAGATTTCCCTCGAAGAGATGGCAGGAAGAATAGGCATAAGACATATGGTATTCAAGATGGTAAAGGCTATAAATTTGTATCTGCATAA 1356 0.4152 MKKTPGHSLHQSDKRKRNVGVQERGAGNGTQRHSVENHTFLTYFKNFFSSFLSGKRKSAPEAPQSDDRKGTHKVGGVSSSTDVSSDSSRSSSKGVLSQSSPSSGTSSSHLGIGNFTFEEIYKATAKFSPDNKIGEGAFGTVYKGRLYDGSLVAVKRANKDLQNKNVAEFKNEIKTLSNIEHRNLVRWRGYLEHGDEKIIVLEYVSNGTLRDHLDGIRGNGLEIGERLDIAIDVAHGITYLHMYTDHPIIHRDIKASNILITDKLRAKVADFGFARKGAEDPAATHISTQIKGTAGYLDPDYMRTQHLSEKSDVYSFGVLLVEMMTGRYPVEPKKPLSERVTIKWAMQMLKEGEIVIAMDQRLKRNPASNKAVQKVLKLAFQCLAPVRRSRPSMQSCVEVLWEIRKDFTDRASSRTHNGSHHSADFPRRDGRKNRHKTYGIQDGKGYKFVSA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0696 451 Gene3D Transferase(Phosphotransferase) domain 1 204 424 - -
Pvu6g0696 451 MobiDBLite consensus disorder prediction 410 444 - -
Pvu6g0696 451 SUPERFAMILY Protein kinase-like (PK-like) 101 403 IPR011009 -
Pvu6g0696 451 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Pvu6g0696 451 MobiDBLite consensus disorder prediction 74 108 - -
Pvu6g0696 451 PANTHER OS01G0253100 PROTEIN 1 441 IPR045271 GO:0004714|GO:0006468
Pvu6g0696 451 Gene3D Phosphorylase Kinase; domain 1 88 203 - -
Pvu6g0696 451 Pfam Protein tyrosine and serine/threonine kinase 130 400 IPR001245 GO:0004672|GO:0006468
Pvu6g0696 451 SMART serkin_6 127 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0696 451 MobiDBLite consensus disorder prediction 1 21 - -
Pvu6g0696 451 ProSiteProfiles Protein kinase domain profile. 127 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0696 451 MobiDBLite consensus disorder prediction 410 441 - -
Pvu6g0696 451 MobiDBLite consensus disorder prediction 55 108 - -
Pvu6g0696 451 PANTHER OS02G0821400 PROTEIN 1 441 - -
Pvu6g0696 451 MobiDBLite consensus disorder prediction 1 34 - -
Pvu6g0696 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0696 Pvu-Chr6 18483391 18487162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0696 69 400 Trihelix Transcription Factor Family AT1G70460 39.941 6.20e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pvu6g0696 PK_Tyr_Ser-Thr 2.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0696 - - gmx:100815871 689.108