Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0638 ATGGGTACTCCAAATGGAAGAGCAATGCACAAGGCCGATGAGGAAATTCCTTTTGACTCCGAAATAAATTTTCACCTGTCAGAATCTAGTCTGGTGGAGGTACGTGGATCAGATTCTGGAGAATCTCGGACTGTTCATCATGAAACGTTGGCGGGTATTGTTTACAGGAGCATAAAAGTTGTGATTTTCTCTAACAAACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTGCAGAAGTTGACTGCTCATCTTGGTTGGGTCTTTGCTATGAGTTTGTTGGGTATCATGCCTCTGGCGGAGCGGTTAGGTTATGCTACCGAGCAGCTGGCATTTTACAGTGGAGATACTGTTGGGGGTCTTTTAAACGCTACATTTGGAAATGCAACAGAATTTATCATCTCAGTATATGCACTGAAAAGTGGAATGACAAGGGTTGTCCAGCTATCTTTGCTGGGATCAATTTTGTCCAATATGTTATTGGTGCTTGGATGTGCATTCTTATGCGGTGGGATTGTGAATCATAAGAAGGAGCAAGTGTTTAACAAGGCAACTGCTTCTGTGAATTCAGGATTATTGCTGATGGCGGTCATGGGCATACTTTTTCCAGCTGTTCTACACTACACGCACACTGAGGTTCGTGTTGGGAAGTCAGAGTTGTCCCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACATATTTTTTCAGTTAAAAAGTCAAAGAAGTCTCTATGTCTCAGTGAACGAGGAAGAGGGTCAGAGTGGAAACAACTCAAATGATGACGAATCACCAGATATTTCTAAATGGGAATCAATAATATGGCTTTCCCTTTTGACTGCTTGGATATCAATCTTGTCCGAATATTTGGTTGGCGCTATAGAGGGAGCATCTACTGCATGGGAAATTCCAGTAGCATTTATCAGTGTCATATTGCTTCCGTTAGTGGGGAATGCAGCTGAGCATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGGGTTGCAATAGGCTCATCCACACAGATATCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATGGGGCATCCTATGGACTTAAACTTTCAGCTTTTTGAAACTGCAGCACTATTTCTTACTGTTATAGTTGTAGCCTTCATGTTACAGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTTATTGTGGCAGCCAGTTTTTATGTACATGTAGATTCCTCTGAATAG 1287 0.4149 MGTPNGRAMHKADEEIPFDSEINFHLSESSLVEVRGSDSGESRTVHHETLAGIVYRSIKVVIFSNKLNLLMPFGPLAILVQKLTAHLGWVFAMSLLGIMPLAERLGYATEQLAFYSGDTVGGLLNATFGNATEFIISVYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHKKEQVFNKATASVNSGLLLMAVMGILFPAVLHYTHTEVRVGKSELSLSRFSSCVMLVAYAAYIFFQLKSQRSLYVSVNEEEGQSGNNSNDDESPDISKWESIIWLSLLTAWISILSEYLVGAIEGASTAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWIMGHPMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHVDSSE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0638 428 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 4 427 - -
Pvu6g0638 428 Pfam Sodium/calcium exchanger protein 87 244 IPR004837 GO:0016021|GO:0055085
Pvu6g0638 428 Pfam Sodium/calcium exchanger protein 279 419 IPR004837 GO:0016021|GO:0055085
Pvu6g0638 428 Gene3D - 116 257 IPR044880 -
Pvu6g0638 428 Gene3D - 265 422 IPR044880 -
Pvu6g0638 428 TIGRFAM caca2: calcium/proton exchanger 57 420 - -
Pvu6g0638 428 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 427 IPR004713 GO:0006812|GO:0008324|GO:0016021
Pvu6g0638 428 TIGRFAM cax: calcium/proton exchanger 71 421 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0638 Pvu-Chr6 17795177 17800230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0638 7 428 Antiporters AT1G55730 70.616 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0638 K07300 - gmx:100799276 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0638 6 17795177 17800230 Pvu6g0638 6 17795177 17800230 ECH