Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0637 ATGATGACGACGCTGAATCTCGCCGCCGGACATCTTCCGCTCCATTCCTCTTCATCAGCCGGTTCTCATCGCCGGACCTCTGTCCGCGCTGTTGCGACGGAAGCCGTCCAGGTGCGACTGCCGGCGCCGAGCCTCTACCAGGTGCTGCGAATCGAGCGCGACGCATCGCCGACGGAGATCAAGTCGGCTTACCGGAGCCTTGCGAAGGTCTACCATCCCGACGCGGTGGTTCGGCATTCAACAGATAACGACAGAGCTGGCGAAGCCGCCGACGAAGACTTTATTCAGATCCGGAGCGCGTACGAGACGCTATCGGATCCATCGGCAAGGGCGATGTATGATCTGACGCTGACGGCTGTGCACGGCGGAAGACACCGCCGGTTTCCGGTTCCGCTTAGTCGAAACCACTCGTCGACGTTTTACGCGACGCGGAGATGGGAAACGGACCAATGCTGGTAG 459 0.6078 MMTTLNLAAGHLPLHSSSSAGSHRRTSVRAVATEAVQVRLPAPSLYQVLRIERDASPTEIKSAYRSLAKVYHPDAVVRHSTDNDRAGEAADEDFIQIRSAYETLSDPSARAMYDLTLTAVHGGRHRRFPVPLSRNHSSTFYATRRWETDQCW* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0637 152 ProSiteProfiles dnaJ domain profile. 44 117 IPR001623 -
Pvu6g0637 152 Pfam DnaJ domain 45 114 IPR001623 -
Pvu6g0637 152 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Pvu6g0637 152 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 152 - -
Pvu6g0637 152 CDD DnaJ 46 106 IPR001623 -
Pvu6g0637 152 SUPERFAMILY Chaperone J-domain 35 118 IPR036869 -
Pvu6g0637 152 Gene3D DnaJ domain 31 127 IPR036869 -
Pvu6g0637 152 PRINTS DnaJ domain signature 46 64 IPR001623 -
Pvu6g0637 152 PRINTS DnaJ domain signature 64 79 IPR001623 -
Pvu6g0637 152 PRINTS DnaJ domain signature 89 109 IPR001623 -
Pvu6g0637 152 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 152 - -
Pvu6g0637 152 SMART dnaj_3 43 109 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0637 Pvu-Chr6 17784549 17785007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0637 46 114 C2H2 Transcription Factor Family AT1G74250 42.029 8.08e-10 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0637 6 17784549 17785007 Pvu6g0637 6 17784549 17785007 ECH
Pvu6g0637 6 17784549 17785007 Pvu8g2914 8 58835488 58836332 PCT