Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0626 ATGAGCGATTCTGCATACAGAGTCGAAACCACACCACGCCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTACCGGAAATCCGATCCTTTCAAGATCGGAAAGTGGAATTGGCATTTGTCTGTGGAGAAGAACAGGGTTTTGTTTGTTAAATTGTTTCCAGAAGTATCCAATCTTACAAGAGACAATCCTCCAATTGCATCTTTCATCATTCGGGTTGTAAGTTCTGTTGGAGATCGCAGGGCCATCGCACACCCAGAAATAAAGGACAAAGTGTTAAAGAACAACGAGGATTTTGTTTGGGCAATTGAGGTTCCACTAACTGGAAAATTCATTATTGACGTTGAGTTTCTAGATTTGAAGACTGCATCCCCAAACGGTGGAGAACCTTGTTCCATTTGGGCAGAAGGATTTACTCAGCAAAGATCAAATGCAAATGCCATAGAGTCTCTTGGTAAAATGCTAACAGAAGGAATCCACACTGACATCACCATCAATGCTTCTGATGGAAGTATAGCAGCTCACAGAGCTGTTCTTGCTGCTAGATCACCTGTATTTCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGTTGTCCACCATAAACATCTCCGATATGTCACTTGATTCATGCCAGGCTTTTCTCAACTATCTTTATGGAATCATCAAACATGAAGACTTTCTGATTCATAGGCTGACCCTTCTTCATGCAGCCGACAAGTATGACATATCTGATCTGAGAGATGCATGCCATGAGAGTCTTCTTGAAGACATTGACACAAAAAATGTACTTGAAAGGCTCCAAAATGCATCTCTATATCAGTTAATTAAACTGAAGATGAGTTGCCTCCGGTATCTTGTGAAGTTTGGCAAAATATATGAAATTCGGGATGATTTCAATACCTTCTTGCAAAATGCAGATAGGGATCTGATTGCTGAAGTCTTCCATGAAGTTCTAGATGCTTGGAAAGGATTCTGA 987 0.4083 MSDSAYRVETTPRLAQWRIENLASCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLFPEVSNLTRDNPPIASFIIRVVSSVGDRRAIAHPEIKDKVLKNNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGGEPCSIWAEGFTQQRSNANAIESLGKMLTEGIHTDITINASDGSIAAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSLDSCQAFLNYLYGIIKHEDFLIHRLTLLHAADKYDISDLRDACHESLLEDIDTKNVLERLQNASLYQLIKLKMSCLRYLVKFGKIYEIRDDFNTFLQNADRDLIAEVFHEVLDAWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0626 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Pvu6g0626 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Pvu6g0626 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Pvu6g0626 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Pvu6g0626 328 SUPERFAMILY POZ domain 147 259 IPR011333 -
Pvu6g0626 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
Pvu6g0626 328 Pfam BTB/POZ domain 155 259 IPR000210 GO:0005515
Pvu6g0626 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0626 Pvu-Chr6 17687024 17690047 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pvu6g0626 BTB 2.1e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0626 K10523 - gmx:100790186 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0626 6 17687024 17690047 Pvu6g0626 6 17687024 17690047 ECH
Pvu6g0626 6 17687024 17690047 Pvu8g2715 8 57503809 57506987 PCT