Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0606 ATGTTCTTAAGAACCACCACCACCATCATCATCTTCTTCTTCTTTACAACAACAATGGCTCTCTCTCACAACAACACAAACTTCTTTTCCTTCTCCTTTCCCTCCTTCACCCTCCGCAACATAACCCTCCTTGGTGACTCCTTCCTCCGCAACGGCCTCGTCGGCCTCACCCTCTCCACCACTGTCCCTGCCTCCTCCTCCGGCACCCTCCTCTTCAACAACCCCATCACCACCACCCCTTCCTTCTCTCTCTCCACTAATTTCACTTTCTCAATCACCAACACCACCACCTCCGCCACCCCCTCCTCCACCTTCTCCTTCTTTCTCAACTCCTCCCACACCCTCCTCTCCCTCCACTTCCACCCCAACCAAAACCATCTCACCCTCGACCTCACCACCACCTCAAACTCCTCCCTTACCAACCCCACTTTCGTTGATCTCAGCACTGACACTCCGATCACTTCTTGGGTTGATTATCACCATGCTGACAAGAAAAAGCTCCAAGTTTTCTTGAACTACTCGTCACCAGCCTCTTCCAAGCCTCAAAACCCTGTCTTGAGCGTTGACCTTGACCTTTATGAGTATTTTAAGGATGGTTTCTATGTGGGGTTTTCCGGTTCCACGCTAGGAAGCACCGAGCTTATCCAACTCATGAGTTGGAGTTTGGAGTTTGAGTCAAACTTGTACCCTCTGATCAATGGTTCTAGCAGCCCTTCGAGTGTTGCGGTTGAGGGCATTCCTGTTTCTTCAAATTCAACCAAGGGTAGTGGTAATAACCGTGGTAAGAGGTTTTTGTTTGGTCTTTGTGTTGCTATTGCTGGTCCTGCTTTTTTCTGCGTCCTGCTTGTGGTTTTGGGGTATGTTTCTTTTCTGAAATGGCGTGGTTTGAGGAATAAGAAAGGCTTTGGGACAGTGGGATGTTGTCCTAAAGAGTTTGGTTACAAGGAGGTGAAGTTGGCCACTAAGGGGTTTCATGCTTCAAGGGTAATTGGGAAAGGATCTTTTGGGACAGTGTACAAGGCTTTGTTTGAGTCTTCTGGGACCATAGCTGCGATTAAAAGGTCAAGACAGTACGACGGGAAAACCGAGTTTTTGGCCGAGTTATCCATTATAGCTAGTTTGAGGCACAAGAATTTGGTTCAACTCCTAGGTTGGTGTGTTGAGAAGGGTGAGTTGTTGCTTGTGTATGAGTATATGCCAAATGGAAGCTTGGACAAGGTGCTTTACCAAGAATGTGAAGGAGGTAATACTAACCATGTGTTGAGTTGGGTTCATAGGGTGAACATTGCTGTTGGGTTGGCTTCTGTTTTGAGCTATTTGCATCAAGAGTGTGAGCAGAGGGTGATTCATAGGGACATCAAGACAGGGAACATATTGCTAGATGGGAGCATGAACCCAAGGTTGGGTGATTTTGGGTTGGCCAAGCTTATGGACCATGACAAGAGTCCTGTTTCAACACTAACTGCTGGGACAATGGGGTACCTTGCTCCTGAGTATCTTCAATGTGGAATGGCAAATGAGAAGAGTGATGTGTTCAGCTATGGGGTGGTGGTGCTTGAGGTGGCTTGTGGGAGGAGGCCAATTGAGAGGGAGGGGCAGAAGATGGTGAATTTGGTGGATTGGGTTTGGGGGTTGCACTCTCAAGGGAGGATCATTGAGGCTGCTGACAGGAAGCTGAATGGGGAGTTTAAGGAAGGGGAAATGAAGAGGCTTTTGCTCTTGGGGTTGAGTTGTGCTAACCCTGATAGTGCTCAGAGGCCTTCCATGAGAAGAGTGTTGCAGATTCTCAACAATGAAGGAGGAGTGTCTCTTGTGGTGCCTAAAGAAAAACCAACACTTACTTTCTCCTCTGGCTTGCCTTTGAGTCTCGAAGACATTGTTTCTGATGCGGAGGAAGACTTGAATTCTGACCAAGTTGTGTGTGAGATCAAAATTGATTGA 1941 0.4766 MFLRTTTTIIIFFFFTTTMALSHNNTNFFSFSFPSFTLRNITLLGDSFLRNGLVGLTLSTTVPASSSGTLLFNNPITTTPSFSLSTNFTFSITNTTTSATPSSTFSFFLNSSHTLLSLHFHPNQNHLTLDLTTTSNSSLTNPTFVDLSTDTPITSWVDYHHADKKKLQVFLNYSSPASSKPQNPVLSVDLDLYEYFKDGFYVGFSGSTLGSTELIQLMSWSLEFESNLYPLINGSSSPSSVAVEGIPVSSNSTKGSGNNRGKRFLFGLCVAIAGPAFFCVLLVVLGYVSFLKWRGLRNKKGFGTVGCCPKEFGYKEVKLATKGFHASRVIGKGSFGTVYKALFESSGTIAAIKRSRQYDGKTEFLAELSIIASLRHKNLVQLLGWCVEKGELLLVYEYMPNGSLDKVLYQECEGGNTNHVLSWVHRVNIAVGLASVLSYLHQECEQRVIHRDIKTGNILLDGSMNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQCGMANEKSDVFSYGVVVLEVACGRRPIEREGQKMVNLVDWVWGLHSQGRIIEAADRKLNGEFKEGEMKRLLLLGLSCANPDSAQRPSMRRVLQILNNEGGVSLVVPKEKPTLTFSSGLPLSLEDIVSDAEEDLNSDQVVCEIKID* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0606 646 Gene3D - 28 227 - -
Pvu6g0606 646 SUPERFAMILY Protein kinase-like (PK-like) 309 606 IPR011009 -
Pvu6g0606 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 224 IPR013320 -
Pvu6g0606 646 SMART serkin_6 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0606 646 CDD STKc_IRAK 330 598 - -
Pvu6g0606 646 Gene3D Transferase(Phosphotransferase) domain 1 399 602 - -
Pvu6g0606 646 PANTHER - 28 629 - -
Pvu6g0606 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pvu6g0606 646 Pfam Protein kinase domain 324 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0606 646 Gene3D Phosphorylase Kinase; domain 1 309 398 - -
Pvu6g0606 646 ProSitePatterns Protein kinases ATP-binding region signature. 330 353 IPR017441 GO:0005524
Pvu6g0606 646 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.7-RELATED 28 629 - -
Pvu6g0606 646 ProSiteProfiles Protein kinase domain profile. 324 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0606 Pvu-Chr6 17485761 17487917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0606 9 632 Receptor kinase-like Gene Family AT5G55830 52.444 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu6g0606 Pkinase 3.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0606 - - gmx:100808744 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0606 6 17485761 17487917 Pvu8g2882 8 58612825 58615119 PCT