Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0581 ATGCACAATTCCTCAGTTCTGCAACTCTCTTTCTCTCCATCTCCGGTTCATGGCAATCTCAAGATGGCCGTGAACAATCGCTGTTTTGTGGAATGGAAAGAGCAGTTTGTTTCACAGGAGCGTGGTAATCGTGTTGTTCACTATTACCTGAAGGATGCTGCTGGGGAATCTATCCTTGCAGTGGTGGGTACTGAGAGGAGTGTTAGGCACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAATCTGTGGTAAGGATGGTTCCATTCCAACAGGTTTCAAATGGCGATCTAGAAGAGAGGTGGTGGATTGGTTGACATCAACGCTATCAAAGCAGAACCTGCAGGGAGATAGAAGTGTATCACCTGGTCATAACTTGGTAAAAGCTCATGAGACCACAAATGACAGTATCAATGAAATTACCTGTACACAAATAACGGATGATAAGGACTTTCCTACGAGTAACTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGAGTTGCATGGAGATGTGGCAAACAACTTAAGCATTATCCTGCTTTTTGGAGGAATGGCATCAAAATAGCTATTCAATCCTTTGTGTTTGTTATGGGGAAGGGAGAGAATCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGGGGGCAGAAAAAGGTCAAGGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTACGAAATCCTCATCCTCGAGAAGTTTTTATCACACCTTATTCTCAAGTTATCAGTGCAGAGTGCGTAGATGGTCCTGCCACAGTCTTGACTCGTGAACACTATGAAAAGTGCATGTCTTTTTTTTCGCCCACTTCGAGGGACAGAACACATTTGTGCTTTAGGCAATTTAGAAGCAACAAAGTAAAGCCCTTTGACTTGAGTAAACTGCGTGGCTACTATGCCCAACCAATTCTTTCTTGCTTGCACCTTGATTCAATTCAGAACCCTGAGAGGCCTGCAGGAGAAAATGAAGACTTGAGTGCAGGTGATGATGTGAAGGTAGGAGCCAAGAGGAGCAGAAGTGATAAGGGGTCTCCTCAGTCTTGGATAAGTCAACAGGGAGTCAGGAAATTGATGAGAAGTAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTATGCAAGATCAGAAAAAAGATTACTTTCTCGGAAGCAGGTTGAGTGTCAACCTTGGTCTAATCACACATACAAGGTTGATGACAAGATTGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGATAGCTCGGAAACAGTTGAAAGTCCAATACGAAGATGTCCAGGATGAAGATGGAAGTGGAAATCTGGAGGAATGGGTCCCTGCTTTCAAGTTTGCCAGGCCTGATAAACTTGGGATGAGGCATTCTGGCCGCCCCACCATCAGACCTACTCCAACTCTTGAAGAACAAGAACTGACTGTTGAGGTTGGGCATGCAGTTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGGGTTGTAACTAGAATTGATCACTGTGGAGATGACAGTGTTCAAGTATACTTTCCTGGAGAATGCCTGCTGATGGAAGTGTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAGTTGGATTAACATTAAGGCTAAACCTGAAATAACTACAACTATATTCTTCACAGCTAATAATAGCTTTAACACAAAGCTTTCCGTGTCCCCATCAATGGACAAAGTTGCGGACACTGTTGGTTTTGGTAATTCATGTCATGGTGATACTTTTAGTGAGAAGTGTGATGAACTGGTTATTGAAGACGAGAAACATGTGTCTTGTGAGGGCTTCACTGACAATGAGGTCTGTATCCCGGATAATAAACCCTCTTCAGAAAAAGATACTGAAGCTGATAATATTGAGATACATGGCTGTTGTGATGAACATAACAGTGATGAGCATGAGAAAGTTAACAATGATGATGATAGTATCAAGAATGGTGATAATAATGATAATAAAGATATCAAGGTGTTTGGAACTTCTGGATTGGACCATGAACCTGTAGACCTCATGGAAGTGGCTGTATAA 2109 0.4263 MHNSSVLQLSFSPSPVHGNLKMAVNNRCFVEWKEQFVSQERGNRVVHYYLKDAAGESILAVVGTERSVRHMCYVVAEEFLEICGKDGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSVSPGHNLVKAHETTNDSINEITCTQITDDKDFPTSNSKLSNSDIVWSGVAWRCGKQLKHYPAFWRNGIKIAIQSFVFVMGKGENHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNPHPREVFITPYSQVISAECVDGPATVLTREHYEKCMSFFSPTSRDRTHLCFRQFRSNKVKPFDLSKLRGYYAQPILSCLHLDSIQNPERPAGENEDLSAGDDVKVGAKRSRSDKGSPQSWISQQGVRKLMRSKQMMVYKTFQVANYARSEKRLLSRKQVECQPWSNHTYKVDDKIELLCQDSGIRGCWFRCTVVQIARKQLKVQYEDVQDEDGSGNLEEWVPAFKFARPDKLGMRHSGRPTIRPTPTLEEQELTVEVGHAVDAWWSDGWWEGVVTRIDHCGDDSVQVYFPGECLLMEVCKKDLRISRDWLGDSWINIKAKPEITTTIFFTANNSFNTKLSVSPSMDKVADTVGFGNSCHGDTFSEKCDELVIEDEKHVSCEGFTDNEVCIPDNKPSSEKDTEADNIEIHGCCDEHNSDEHEKVNNDDDSIKNGDNNDNKDIKVFGTSGLDHEPVDLMEVAV* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0581 702 MobiDBLite consensus disorder prediction 335 352 - -
Pvu6g0581 702 Gene3D - 155 313 IPR043151 -
Pvu6g0581 702 MobiDBLite consensus disorder prediction 330 364 - -
Pvu6g0581 702 Pfam Agenet domain 413 487 IPR008395 -
Pvu6g0581 702 SMART BAH_4 187 306 IPR001025 GO:0003682
Pvu6g0581 702 MobiDBLite consensus disorder prediction 653 689 - -
Pvu6g0581 702 Pfam BAH domain 190 297 IPR001025 GO:0003682
Pvu6g0581 702 CDD BAH_plant_1 182 311 - -
Pvu6g0581 702 SMART agenet_At_2 494 552 IPR014002 -
Pvu6g0581 702 SMART agenet_At_2 408 473 IPR014002 -
Pvu6g0581 702 MobiDBLite consensus disorder prediction 653 679 - -
Pvu6g0581 702 ProSiteProfiles BAH domain profile. 187 306 IPR001025 GO:0003682
Pvu6g0581 702 PANTHER OS07G0607300 PROTEIN 25 673 - -
Pvu6g0581 702 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 25 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0581 Pvu-Chr6 17145957 17152035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0581 422 550 PHD Transcription Factor Family AT5G58610 31.343 5.38e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0581 - - gsj:114395106 1174.46