Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0564 ATGATGTTGTTTGTCTCATCACTCCATTCTCTTACTCTTAGACACCTTGGCAGTAGTTTTCTGAGATATTTAGTTAAGCCGGTTTTCTTGCATGGCTTTTCTGGTTTCCTTCATCTACTGTTATTGGTGGTGCTTTTAGTGTCGCTGCTGTGGAGGAAAGTCGCAGTTGGAACCAGAGAACGTTCTACAAAGAACATTACTAATGCCTTGTTTGCTAAGGCTCCACTTTGTTCCCTACTTGTTTCGGCTTTCAATCTTCTACTCTTTTTGTTTGATTACTTTTGTTGGTATAAAAATGGTTGGTCAGAAGAAAAGCTTGCGACCCTTTTGGATTTTCTGCTCAAAACAGTTGCTTGGGGTGTTGGTGGTGTTTGCTTGCACATGGAACTCTTCATTTCAAGGGAAAGAAGATTACCATTCTTCTTCAGAGCTTGGTGCGTCCTTTTCCTCTCTGTTTCCGGCTATTGCTTTATAGTGGACTTTGCTCTCTATGAAAAAAAGCATTCTGCTTTGTCCATTCAGAGCTTAGTTTCTGATGCTTTCTCTGTGTGTGCGTGTTTATTCTTCTTTTACTTGGACTTGCTTGTAAAAAATGAGAGTGGAGTAGGAGATAGTACTTTTCAAGAATCTCTTTTGGATGCTGACTCAAGAGGTGATGTGTTTGGGTCAAAAGAGACCAAGGGGGGTGACACTGTTACACCTTACTCTAATGCTGGAATATTTGGCCTTCTTACCTTCTCTTGGATTGGTCCTCTAATTACTGTTGGCAGGAAGAAGTCTTTAGACCTTGAGGATGTCCCCCAACTTGACAAAAGAGACAGTTTAACTGGAGCTTTTCCAACTTTTAGGGATAGGCTTGAGGCACAATGTGGAGCTGTTAACACAGTGACCACACTTATGTTAGTGAAGTCATTAGTATTCTCAAGCTGGAAAGAAATTATTTTCACAGCCATACTTGCATTGCTAAACACTTTGGCTTCTTTTGTTGGTCCCTATCTTATTGATGGTTTTGTTCAATTCCTTAACGGACAACGAAAATTTGAGCACGAGGGCCTTATATTGGTGACTGCATTTTTAGTGGCAAAGCTTTTGGAGGGCCTCACAAAGAGGCACTGGTTTTTTAGGTTGCAGCAGGGTCACACTACTGGGGAAATAATCAACTTCATGACAGTTGATGCAGAAAAAGTTGGTGAGTTCAGTTGGCATCTACATGATCTGTGGTTAGTAGTTCTACAGGTTATAGTAGCCTTGTTGATTTTGTATAGAAATCTTGGGCTTGCTTCAATTTCTGGCCTTGTTGCAATTCTCATTGTAATGTGGGCAAACATTCCCCTGGGTTCAATCCAAGAGAAGTTTCATAACAAGTTGATGGAGTCAAAAGATGCAAGAATGAAAACAACATCTGAGATTTTGAGGAACATGCGGATTCTCAAACTACAAGGATGGGAAATGAAGTTTTTGTCTAACATAACCGAACTCAGAAAGATCGAGCAAGGCTGGTTAAAAAAAGTTATGTACTCGTTAGCCATGATCATATTTGTATTTTGGTGTGCCCCAGCGTTTGTGTCAGTGGTTACTTTTGGTACTTCTATACTTGGAGGGATCCCCCTTGAGTCAGGGAAGATACTGTCTACACTAGCCACATTCCAGATTCTCCAAGAACCCATTTATAATCTTCCAGAGACAATTTCAATGATGGCACAGACCAAGGTTTCTCTTGACAGGATTGCATCTTTCCTTCGTCTGGATGAGATTGTATTTGATGTTGTGGAGAAGCTTCCACAAGGTAGTTCTAATGTAGCTATTGAAGTAGTTGATGGGAATTTCTCTTGGGATTCGTTTTCCCCTAGTATAACATTGCAAAACATAAATCTCAGAGTTTTTCATGGCATGAGGGTTGCTGTTTGTGGTAGTGTTGGATCAGGCAAGTCAACTTTGCTTTCTTGTATATTAGGAGAAGTACCCAAGAAATCAGGGATTTTGAAGGTATGTGGAACAAAGGCCTATGTAGCTCAGTCATCATGGATACAAAGTAGCACGATAGAGGATAATATATTGTTTGGCAAGGACATGGAAAGGCAAAGGTACGAGAAGGTTCTTGAAGCTTGTTGCCTAAAGAAGGATCTAGATATTCTGTCATTTGGAGATCAGACTATAATAGGAGAGAGGGGGATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGTGCTCTATACCATGATGCTGATATATATCTATTTGATGATGTGTTTAGTGCTGTGGATGCTCACACAGGATCTCATCTCTTTCAGGAATGCTTACTCGACCATTTAAGTTCAAAGACAGTGGTTTATGTTACTCATCAAGTAGAGTTCTTACCTGCTGCTGACCTTATTTTGGTCATGAAAGATGGGAAGATTATTCAAAGTGGAAAATATAATGATCTGCTCAACTCAGGCACTGATTTTATGGAACTTGTTGGTGCTCATAAAGAAGCTTTGTCTGCACTTGATTCAATAGATGGAGGGAAAGCGTCTTATACAACAAGTACATCACAAGAGGATGTAAGTTTCGTTGTTTCTCACGGTATTGAAGAAAGGGAAGTAAAGAAAAATGAGCAAAATGGTGGAAAAGATAACAAATGTGATCCAAAAGGCCAGCTTATCCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTTTATTGGAAATATGTAACAACAACATATGGAGGAGCACTTATACCACTCATACTGTTGGCTGAAATTTTGTTTCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCTGTCTCAACTGATGTTGAGCCACCTGTTGGAGGAAGTGCCCTTATACTTGTATATGTAGCTTTGGCCATAGGAAGTTCTATCTGTGTCCTTGCTAGAGCAACACTTGTTGCCACAACTGGTTATGAGACAGCTACTTCACTCTTCAACAACATGCATTTCAGCATTTTCCGTGCTCCCATGTCATTTTTCGATGCCACTCCAAGTGGGAGAATCCTTAATAGGGCTTCTACCGATCAAAGTGCAGTGGATATAGACATTCCTTTTCAAACTGGATCATTTGCTTCCTCTGTGGTCCATGTTCTTGGAATTGTAGGAGTAATGTCTCAAGTTGCATGGCAGGTTTTCATTGTCTTTATTCCTGTTATAGCAATCAACATCTGGTATCAGCAATATTATTTACCATCAGCCCGGGAACTATCACGTTTAGTTGGGGTATGCAACGCTCCTGTCATTCAGCACTTTGCTGAAACAATATCAGGTTCATCAACCATCAGGAGCTTTGATCAGGTGCCAGGATTTCAGCAAACAAATATGAAACTGATAGATGGATATTCTCGCCCCAAGTTCAACAATGCTGCTGCTATGGAATGGTTGTGCTTCCGATTAGATATGTTGTCTTCTATCACATTTGCCTTTTGCTTGATATTCTTGATATCTATTCCACATGGATTCATAGACTCAGGTATTGCTGGTTTAGCTGTAACCTATGGCCTTAATCTGAACATTATACAATCATGGATGATATGGGAACTTTGCAGCTTGGAGAACAAAATTATATCAGTGGAAAGAATTCTTCAGTATACTTCCATTCCTAGTGAGCCTCCTCTTGTAGAAGAAAACCGGCCACATGATTCTTGGCCATCATGTGGCAAGATTGATATTCACAACTTGCAGGTACGTTACGCTCCACATATGCCATTTGTGTTGCATGGCTTTACATGCACATTTCATGGAGGACTTAAAACTGGAATTGTTGGGAGAACAGGAAGTGGCAAATCAACTCTCATACAAACACTATTCCGAATTGTTGAGCCCACTGTTGGGAGAGTTATGATTGATGGCATCAACATCTCATCCATTGGAATTTATGATTTGAGGTCTAGACTGAGCATTATCCCTCAGGATCCAACCATGTTTGAAGGTACTGTGAGAAGTAATCTGGACCCACTTGAAGAGTACACAGATGAACAAATTTGGGAGGCCCTTGATAAGTGTCAACTTGGAGATGAAGTCAGAAGGAAAGAAGGAAAACTAGACTCTGCAGTTTGTGAAGATGGAGAGAATTGGAGTATGGGCCAGAGGCAATTGGTGTGTCTTGGTAGAGTGCTGCTTAAGAAGAGTAGGGTCTTGGTGCTAGATGAAGCTACTGCATCTGTTGACACAGCTACAGATAATTTGATTCAGCAAACTCTTAGGCAATATTTTTCTGATTGCACAGTCATTACAATTGCCCATAGGATAACTTCTGTCATTAACAGTGATATGATTCTACTACTTAATGAAGGACTTATTGAGGAGTATGATTCCCCAGCAAGGTTGCTAGAGGACAAGTTTTCTTCTTTTGCTCAACTTGTGGCAAAGTATACCACAAGGTCCAATTCCAGTTTGGACCAACTATAA 4437 0.4032 MMLFVSSLHSLTLRHLGSSFLRYLVKPVFLHGFSGFLHLLLLVVLLVSLLWRKVAVGTRERSTKNITNALFAKAPLCSLLVSAFNLLLFLFDYFCWYKNGWSEEKLATLLDFLLKTVAWGVGGVCLHMELFISRERRLPFFFRAWCVLFLSVSGYCFIVDFALYEKKHSALSIQSLVSDAFSVCACLFFFYLDLLVKNESGVGDSTFQESLLDADSRGDVFGSKETKGGDTVTPYSNAGIFGLLTFSWIGPLITVGRKKSLDLEDVPQLDKRDSLTGAFPTFRDRLEAQCGAVNTVTTLMLVKSLVFSSWKEIIFTAILALLNTLASFVGPYLIDGFVQFLNGQRKFEHEGLILVTAFLVAKLLEGLTKRHWFFRLQQGHTTGEIINFMTVDAEKVGEFSWHLHDLWLVVLQVIVALLILYRNLGLASISGLVAILIVMWANIPLGSIQEKFHNKLMESKDARMKTTSEILRNMRILKLQGWEMKFLSNITELRKIEQGWLKKVMYSLAMIIFVFWCAPAFVSVVTFGTSILGGIPLESGKILSTLATFQILQEPIYNLPETISMMAQTKVSLDRIASFLRLDEIVFDVVEKLPQGSSNVAIEVVDGNFSWDSFSPSITLQNINLRVFHGMRVAVCGSVGSGKSTLLSCILGEVPKKSGILKVCGTKAYVAQSSWIQSSTIEDNILFGKDMERQRYEKVLEACCLKKDLDILSFGDQTIIGERGINLSGGQKQRIQIARALYHDADIYLFDDVFSAVDAHTGSHLFQECLLDHLSSKTVVYVTHQVEFLPAADLILVMKDGKIIQSGKYNDLLNSGTDFMELVGAHKEALSALDSIDGGKASYTTSTSQEDVSFVVSHGIEEREVKKNEQNGGKDNKCDPKGQLIQEEEREKGKVGFSVYWKYVTTTYGGALIPLILLAEILFQLLQIGSNYWMAWATPVSTDVEPPVGGSALILVYVALAIGSSICVLARATLVATTGYETATSLFNNMHFSIFRAPMSFFDATPSGRILNRASTDQSAVDIDIPFQTGSFASSVVHVLGIVGVMSQVAWQVFIVFIPVIAINIWYQQYYLPSARELSRLVGVCNAPVIQHFAETISGSSTIRSFDQVPGFQQTNMKLIDGYSRPKFNNAAAMEWLCFRLDMLSSITFAFCLIFLISIPHGFIDSGIAGLAVTYGLNLNIIQSWMIWELCSLENKIISVERILQYTSIPSEPPLVEENRPHDSWPSCGKIDIHNLQVRYAPHMPFVLHGFTCTFHGGLKTGIVGRTGSGKSTLIQTLFRIVEPTVGRVMIDGINISSIGIYDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRRKEGKLDSAVCEDGENWSMGQRQLVCLGRVLLKKSRVLVLDEATASVDTATDNLIQQTLRQYFSDCTVITIAHRITSVINSDMILLLNEGLIEEYDSPARLLEDKFSSFAQLVAKYTTRSNSSLDQL* 1479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0564 1478 Gene3D - 587 836 IPR027417 -
Pvu6g0564 1478 SUPERFAMILY ABC transporter transmembrane region 912 1214 IPR036640 GO:0005524|GO:0016021
Pvu6g0564 1478 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 380 1478 - -
Pvu6g0564 1478 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 98 378 - -
Pvu6g0564 1478 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 98 378 - -
Pvu6g0564 1478 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 380 1478 - -
Pvu6g0564 1478 CDD ABC_6TM_ABCC_D2 913 1207 IPR044726 GO:0140359
Pvu6g0564 1478 CDD ABCC_MRP_domain1 602 802 - -
Pvu6g0564 1478 CDD ABC_6TM_ABCC_D1 315 576 IPR044746 GO:0140359
Pvu6g0564 1478 CDD ABCC_MRP_domain2 1229 1449 - -
Pvu6g0564 1478 ProSitePatterns ABC transporters family signature. 727 741 IPR017871 GO:0005524
Pvu6g0564 1478 SMART AAA_5 1257 1442 IPR003593 -
Pvu6g0564 1478 SMART AAA_5 629 802 IPR003593 -
Pvu6g0564 1478 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 314 568 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu6g0564 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 599 824 IPR027417 -
Pvu6g0564 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1222 1456 IPR027417 -
Pvu6g0564 1478 Gene3D - 1215 1467 IPR027417 -
Pvu6g0564 1478 Gene3D ABC transporter type 1, transmembrane domain 875 1213 IPR036640 GO:0005524|GO:0016021
Pvu6g0564 1478 Gene3D ABC transporter type 1, transmembrane domain 292 584 IPR036640 GO:0005524|GO:0016021
Pvu6g0564 1478 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1233 1465 IPR003439 GO:0005524
Pvu6g0564 1478 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 915 1195 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu6g0564 1478 Pfam ABC transporter transmembrane region 378 555 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu6g0564 1478 Pfam ABC transporter transmembrane region 915 1157 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu6g0564 1478 SUPERFAMILY ABC transporter transmembrane region 304 581 IPR036640 GO:0005524|GO:0016021
Pvu6g0564 1478 Pfam ABC transporter 620 753 IPR003439 GO:0005524
Pvu6g0564 1478 Pfam ABC transporter 1249 1396 IPR003439 GO:0005524
Pvu6g0564 1478 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 825 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0564 Pvu-Chr6 16946966 16953003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0564 602 853 Calmodulin-binding Proteins AT2G36910 29.779 2.42e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0564 - K05666 gmx:100775358 2402.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2854 8 58501113 58501901 Pvu6g0564 6 16946966 16953003 PCT