Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0559 ATGCAAACATCTCAGAATCATAAAATTTCTTATGGCTCTGGTGGGTTCTATGTGGAGCCTGTGCAAAATTTGGAGTCATATTGCTTACCATCAAGTGAGAACATAGACAATTACTCTTCTGATAACAGCAGCCAAACAACCTACCCTTCAGTCCAAACTTTAGACCAATATCTCACCCTTGAATCTGCTTCCACAAGCAACAGTTTCCCTTGCCAAAATTCTCCACCTGCTCTCAGTTTCTCATCAAACAATAGCCCGTTGTCAAACCTAGAGTCAAATTCATATGTGTTAAGGCCACAGCATTCTCTTGAAATTGCTAATGGCCCACCAGAGAATGATTCTTACCCGATTCTTGACTTTGATGAGCTGACACATAAGATAAGAGAACTGGAAACTGCTATGCTGGAACCTAATGCAGATATGCTAGATATCTATGGTGCTATAATGCCAGGAGAAGCTGATTCAATTTTGTTAGAGACTGAGAAGTGGAAAGAAATGATGGAGATGGTATCCAGAGGGGATTTGAAAGAGATGCTTTATACTTGTGCAAAGGCAATGGCTGTTAAGGATATGGTGATAACTGAATGGATGATGTCAGAGTCGCGTAAGATGGTTTCTGTTTTGGGCAATCCAATTCAGCGGTTGGGAGCATACATTGTGGAGTCTCTTGTGGCAAGGATGGCTGCTTCAGGAAGCACAATCTACAAATCCTTGAAATGTAGTGAGCCTACTGGTAATGAACTACTTTCATACATGCATGTACTCTATGAAGTTTGTCCATACTTCAAGTTTGGATACATGTCAGCAAATGGAGCAATTGCCGAAGCTCTGAAGGACGAAAGTGAAGTCCACATAATAGACTTTCAGATTTCCCAGGGAACTCAATGGGTGAGCCTGATTCAGGCTCTTGCTCGCCGGCCCGGAGGACCACCAAATATCCGAATATCGGGTGTTGATGACTCCTTTTCATCTTATGCACGGGGAGGAGGACTTGATATTGTTGGGAAAAGGTTATCAGCACTTGCAGAGTCATGTAATGTACCCTTTGAGTTCAATGCTGTGAGAGTACCTGCTTCTCAAGTGCAACTTAAAGACCTTGAACTTCGCCCTTATGAAGCTGTGGCTGTGAACTTTGCCATCATGTTGCACCATGTGCCTGATGAAAGTGTGAACGGCCACAATCATCGCGATAGGTTGTTGAGATTGGCCAAGCACTTGTCTCCTAAAGTGGTGACTCTTGTTGAGCAAGAATTTAACACCAACAATGCCCCATTCTTGCAGCGATTCGTTGAGACAATGAACTACTACTTGGCTGTTTTTGATTCAATTGATGCTGCTCTTCCAAGGGAGCACAAAGAGAGGATTAATGTGGAGCAGCACTGTTTGGCTCGTGAAGTTGTCAACTTAATAGCATGTGAAGGAGAAGAAAGAGTTGAACGTCATGAGCTTCTGAATAAGTGGAGAATGCGTTTTACACAGGCTGGATTTGCGCCTTATCCACTGAACTCTGTTATTAATTCTTCAATCAAGGATCTTCTCCAGACCTACCATGGTCATTACTCTCTGGAAGAAAAAGATGGTGCACTATTTCTTGGTTGGAAGAATCAAGTTCTTATTGCCTCTTGTGCTTGGAGATGA 1638 0.428 MQTSQNHKISYGSGGFYVEPVQNLESYCLPSSENIDNYSSDNSSQTTYPSVQTLDQYLTLESASTSNSFPCQNSPPALSFSSNNSPLSNLESNSYVLRPQHSLEIANGPPENDSYPILDFDELTHKIRELETAMLEPNADMLDIYGAIMPGEADSILLETEKWKEMMEMVSRGDLKEMLYTCAKAMAVKDMVITEWMMSESRKMVSVLGNPIQRLGAYIVESLVARMAASGSTIYKSLKCSEPTGNELLSYMHVLYEVCPYFKFGYMSANGAIAEALKDESEVHIIDFQISQGTQWVSLIQALARRPGGPPNIRISGVDDSFSSYARGGGLDIVGKRLSALAESCNVPFEFNAVRVPASQVQLKDLELRPYEAVAVNFAIMLHHVPDESVNGHNHRDRLLRLAKHLSPKVVTLVEQEFNTNNAPFLQRFVETMNYYLAVFDSIDAALPREHKERINVEQHCLAREVVNLIACEGEERVERHELLNKWRMRFTQAGFAPYPLNSVINSSIKDLLQTYHGHYSLEEKDGALFLGWKNQVLIASCAWR* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0559 545 Pfam GRAS domain family 175 545 IPR005202 -
Pvu6g0559 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 544 IPR005202 -
Pvu6g0559 545 MobiDBLite consensus disorder prediction 65 84 - -
Pvu6g0559 545 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 544 - -
Pvu6g0559 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0559 Pvu-Chr6 16853048 16854759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0559 1 545 GRAS Transcription Factor Family AT1G50600 56.261 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu6g0559 GRAS 7.1e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0559 - - gmx:100785400 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0559 6 16853048 16854759 Pvu8g2843 8 58445728 58448862 PCT