Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0556 ATGATGCCAAGTGTTAAGCCTGATGCATCTGACAGAGACTCAGAGCCATTTGTTGAACTTGATCCAACTAGAAGATATGGCAGATACAGTGAACTTCTGGGATGTGGTGCTGTGAAAAAGGTATACAGGGCATTTGATCAAGAAGAAGGGATAGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAACTTCAGTGATGACCCTGCAATGGTGGAAAGGCTTTACTCTGAGGTGAGATTGCTCAGAAGCTTGACCAACAAAAACATCATATCCCTTTACAGTGTTTGGAGGGATGAGAAACACAACACTTTGAACTTCATCACTGAGGTCTGCACCAGTGGGAATCTGAGGGAGTACAGGAAGAAACACAGGCATGTGTCCATGAGGGCCTTGAAAAAGTGGTCCAAGCAGATTCTGGAAGGGTTGAATTACTTGCATGTGCATGACCCTTGTATCATCCACAGAGACCTCAACTGCAGTAATGTGTTTGTCAATGGGAACACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCTATTGTGGGGAAGAGCCACTCTGCACATTCAGTTCTTGGAACACCAGAATTTATGGCACCTGAGTTGTATGATGAAGACTACACTGAAATGGTTGACATATACTCATTTGGAATGTGTGTGTTGGAGATAGTAACACTAGAGATTCCATATAGTGAATGTGACAATGTTGCCAAGATATACAAGAAGGTGTCATCAGGTGTGAGACCTGAAGCCTTGAGCAAGATCCAAGATCCTGAAGTGAAGGCCTTCATAGAGAAGTGTCTTGCTCAGCCAAGGGCTAGACCTTCTGCTGCAGAGTTGCTCAAGGACCCTTTCTTTGATTTACATGATTATGAAGAAAATGATGACTCTAATGCTTCATGA 900 0.4411 MMPSVKPDASDRDSEPFVELDPTRRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVERLYSEVRLLRSLTNKNIISLYSVWRDEKHNTLNFITEVCTSGNLREYRKKHRHVSMRALKKWSKQILEGLNYLHVHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKSHSAHSVLGTPEFMAPELYDEDYTEMVDIYSFGMCVLEIVTLEIPYSECDNVAKIYKKVSSGVRPEALSKIQDPEVKAFIEKCLAQPRARPSAAELLKDPFFDLHDYEENDDSNAS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0556 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0556 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 297 - -
Pvu6g0556 299 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Pvu6g0556 299 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Pvu6g0556 299 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Pvu6g0556 299 CDD STKc_WNK 25 285 - -
Pvu6g0556 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0556 299 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 297 - -
Pvu6g0556 299 PIRSF TyrPK_CSF1-R 24 130 - -
Pvu6g0556 299 PIRSF TyrPK_CSF1-R 118 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0556 Pvu-Chr6 16819469 16821727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0556 11 286 MAP Kinase Kinase Kinase AT5G55560 85.145 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu6g0556 Pkinase 3.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0556 K08867 - gmx:100782039 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0556 6 16819469 16821727 Pvu6g0556 6 16819469 16821727 ECH
Pvu6g0556 6 16819469 16821727 Pvu8g2839 8 58417195 58419752 PCT